Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 44.31 | 95.6 |
| CDX69208 | Canola | nucleus | 93.59 | 93.59 |
| Bra011667.1-P | Field mustard | nucleus | 99.71 | 92.18 |
| CDX72580 | Canola | nucleus | 85.13 | 86.14 |
| CDY47055 | Canola | nucleus | 81.34 | 85.32 |
| AT4G36160.2 | Thale cress | nucleus | 86.59 | 77.95 |
| CDY72666 | Canola | nucleus | 31.2 | 65.64 |
| CDY38177 | Canola | nucleus | 66.18 | 62.88 |
| VIT_04s0023g03110.t01 | Wine grape | nucleus | 61.22 | 62.69 |
| CDY70728 | Canola | nucleus | 32.07 | 61.45 |
| CDY30778 | Canola | nucleus | 48.4 | 56.27 |
| CDY45221 | Canola | nucleus | 48.1 | 56.12 |
| GSMUA_Achr8P12100_001 | Banana | nucleus | 52.77 | 54.52 |
| CDY35029 | Canola | cytosol | 32.36 | 53.37 |
| GSMUA_Achr11P... | Banana | nucleus | 51.6 | 52.99 |
| CDY62781 | Canola | nucleus | 22.74 | 49.37 |
| CDY00280 | Canola | nucleus | 36.15 | 47.69 |
| CDX98078 | Canola | nucleus | 44.61 | 45.27 |
| CDY26551 | Canola | nucleus | 44.61 | 45.0 |
| CDY15987 | Canola | nucleus | 44.31 | 44.84 |
| CDY21041 | Canola | nucleus | 44.31 | 43.06 |
| CDY46914 | Canola | nucleus | 44.9 | 42.66 |
| CDY31835 | Canola | nucleus | 44.61 | 42.38 |
| CDX87246 | Canola | nucleus | 41.4 | 42.26 |
| CDY03671 | Canola | nucleus | 40.23 | 42.2 |
| CDX82202 | Canola | nucleus | 40.23 | 42.2 |
| CDY31249 | Canola | nucleus | 44.9 | 42.19 |
| CDX96362 | Canola | nucleus | 39.65 | 41.85 |
| CDX72846 | Canola | nucleus | 39.65 | 41.85 |
| CDY16776 | Canola | nucleus | 39.94 | 41.27 |
| CDY26917 | Canola | nucleus | 36.44 | 40.58 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 37.03 | 39.44 |
| CDY58006 | Canola | nucleus | 39.94 | 39.37 |
| CDY30057 | Canola | nucleus | 45.19 | 39.34 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 36.73 | 38.65 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 37.03 | 38.25 |
| CDX73267 | Canola | cytosol | 36.15 | 38.15 |
| CDY30716 | Canola | nucleus | 39.94 | 37.95 |
| CDX67870 | Canola | nucleus | 36.73 | 37.5 |
| CDY41554 | Canola | nucleus | 38.78 | 37.25 |
| CDY27524 | Canola | nucleus | 39.36 | 37.09 |
| CDX80045 | Canola | nucleus | 38.78 | 37.05 |
| CDX90756 | Canola | nucleus | 33.82 | 34.94 |
| CDX93819 | Canola | nucleus | 37.03 | 34.89 |
| CDY05099 | Canola | nucleus | 33.82 | 34.83 |
| CDY01243 | Canola | nucleus | 37.32 | 34.5 |
| CDY22285 | Canola | nucleus | 34.69 | 34.29 |
| CDY71976 | Canola | nucleus | 34.69 | 34.1 |
| CDX87372 | Canola | nucleus | 35.57 | 33.89 |
| CDX88550 | Canola | nucleus | 35.57 | 33.61 |
| CDY70056 | Canola | nucleus | 34.4 | 33.05 |
| CDY00281 | Canola | cytosol | 2.92 | 14.93 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078CKI6 | EnsemblPlants:CDX75558 | ProteinID:CDX75558 | ProteinID:CDX75558.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00121461001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF107 | SUPFAM:SSF101941 | UniParc:UPI0004EECE52 | : | : | : |
Description
BnaA01g01440D
Coordinates
chrLK031804:-:1642567..1644554
Molecular Weight (calculated)
39753.5 Da
IEP (calculated)
6.637
GRAVY (calculated)
-0.899
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MESVDQSCSV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIRDIDLYRI EPWDLQEKCR IGYEERNEWY FFSHKDKKYP TGTRTNRATI AGFWKATGRD
101: KAVYDKSKLI GMRKTLVFYK GRAPNGQKTD WIMHEYRLES DENAPPQEEG WVVCRAFKKK PTTGQAKNTE TWRSSYFYEE LPTGVGSAME PLNYVSKQKQ
201: NIFAQDVFPP LTNMKRPMSS TSITSSENIH NKYKRPLIEE DELINSQNKD KRKRTSVVTT DWRALDKFVA SQLMSQEEGV LDFGGHKEDG SNKIGHCNNE
301: ESNNNGIEMA SSSLLSDREE ENRFISGFLC TNLDDDLYRD LHV
101: KAVYDKSKLI GMRKTLVFYK GRAPNGQKTD WIMHEYRLES DENAPPQEEG WVVCRAFKKK PTTGQAKNTE TWRSSYFYEE LPTGVGSAME PLNYVSKQKQ
201: NIFAQDVFPP LTNMKRPMSS TSITSSENIH NKYKRPLIEE DELINSQNKD KRKRTSVVTT DWRALDKFVA SQLMSQEEGV LDFGGHKEDG SNKIGHCNNE
301: ESNNNGIEMA SSSLLSDREE ENRFISGFLC TNLDDDLYRD LHV
001: MKKIMESVDQ SCSVPPGFRF HPTDEELVGY YLRKKVASQK IDLDVIRDID LYRIEPWDLQ ESCRIGYEER NEWYFFSHKD KKYPTGTRTN RATMAGFWKA
101: TGRDKAVYDK SKLIGMRKTL VFYKGRAPNG QKTDWIMHEY RLESDENAPP QEEGWVVCRA FKKKPMTGQA KNTETWSSSY FYDELPSGVR SVTEPLNYVS
201: KQKQNVFAQD LMFKQELEGS DIGLNFIHCD QFIQLPQLES PSLPLTKRPV SLTSITSLEK NKNIYKRHLI EEDVSFNALI SSGNKDKKKK KTSVMTTDWR
301: ALDKFVASQL MSQEDGVSGF GGHHEEDNNK IGHYNNEESN NKGSVETASS TLLSDREEEN RFISGLLCSN LDYDLYRDLH V
101: TGRDKAVYDK SKLIGMRKTL VFYKGRAPNG QKTDWIMHEY RLESDENAPP QEEGWVVCRA FKKKPMTGQA KNTETWSSSY FYDELPSGVR SVTEPLNYVS
201: KQKQNVFAQD LMFKQELEGS DIGLNFIHCD QFIQLPQLES PSLPLTKRPV SLTSITSLEK NKNIYKRHLI EEDVSFNALI SSGNKDKKKK KTSVMTTDWR
301: ALDKFVASQL MSQEDGVSGF GGHHEEDNNK IGHYNNEESN NKGSVETASS TLLSDREEEN RFISGLLCSN LDYDLYRDLH V
Arabidopsis Description
ANAC076NAC domain containing protein 76 [Source:TAIR;Acc:AT4G36160]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.