Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 44.31 | 95.6 |
| CDX75558 | Canola | nucleus | 93.59 | 93.59 |
| Bra011667.1-P | Field mustard | nucleus | 95.63 | 88.41 |
| CDX72580 | Canola | nucleus | 86.59 | 87.61 |
| CDY47055 | Canola | nucleus | 82.8 | 86.85 |
| AT4G36160.2 | Thale cress | nucleus | 86.88 | 78.22 |
| CDY72666 | Canola | nucleus | 31.2 | 65.64 |
| VIT_04s0023g03110.t01 | Wine grape | nucleus | 62.1 | 63.58 |
| CDY38177 | Canola | nucleus | 66.18 | 62.88 |
| CDY70728 | Canola | nucleus | 32.07 | 61.45 |
| CDY30778 | Canola | nucleus | 49.56 | 57.63 |
| CDY45221 | Canola | nucleus | 49.27 | 57.48 |
| GSMUA_Achr8P12100_001 | Banana | nucleus | 53.64 | 55.42 |
| GSMUA_Achr11P... | Banana | nucleus | 52.19 | 53.59 |
| CDY35029 | Canola | cytosol | 32.07 | 52.88 |
| CDY62781 | Canola | nucleus | 22.74 | 49.37 |
| CDY00280 | Canola | nucleus | 36.44 | 48.08 |
| CDX98078 | Canola | nucleus | 46.36 | 47.04 |
| CDY26551 | Canola | nucleus | 46.36 | 46.76 |
| CDY15987 | Canola | nucleus | 46.06 | 46.61 |
| CDY21041 | Canola | nucleus | 45.48 | 44.19 |
| CDY31249 | Canola | nucleus | 45.77 | 43.01 |
| CDY46914 | Canola | nucleus | 45.19 | 42.94 |
| CDY31835 | Canola | nucleus | 44.9 | 42.66 |
| CDY03671 | Canola | nucleus | 40.52 | 42.51 |
| CDX82202 | Canola | nucleus | 40.52 | 42.51 |
| CDX87246 | Canola | nucleus | 41.4 | 42.26 |
| CDX96362 | Canola | nucleus | 39.65 | 41.85 |
| CDX72846 | Canola | nucleus | 39.65 | 41.85 |
| CDY16776 | Canola | nucleus | 40.23 | 41.57 |
| CDY26917 | Canola | nucleus | 36.73 | 40.91 |
| CDY30057 | Canola | nucleus | 46.65 | 40.61 |
| CDY58006 | Canola | nucleus | 40.52 | 39.94 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 37.32 | 39.75 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 37.32 | 38.55 |
| CDY30716 | Canola | nucleus | 40.52 | 38.5 |
| CDX73267 | Canola | cytosol | 36.44 | 38.46 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 36.44 | 38.34 |
| CDY41554 | Canola | nucleus | 39.36 | 37.82 |
| CDX67870 | Canola | nucleus | 36.73 | 37.5 |
| CDX80045 | Canola | nucleus | 38.78 | 37.05 |
| CDY27524 | Canola | nucleus | 39.07 | 36.81 |
| CDX93819 | Canola | nucleus | 37.32 | 35.16 |
| CDY01243 | Canola | nucleus | 37.61 | 34.77 |
| CDX90756 | Canola | nucleus | 33.53 | 34.64 |
| CDY05099 | Canola | nucleus | 33.53 | 34.53 |
| CDY22285 | Canola | nucleus | 34.69 | 34.29 |
| CDY71976 | Canola | nucleus | 34.69 | 34.1 |
| CDX87372 | Canola | nucleus | 35.28 | 33.61 |
| CDX88550 | Canola | nucleus | 35.28 | 33.33 |
| CDY70056 | Canola | nucleus | 34.4 | 33.05 |
| CDY00281 | Canola | cytosol | 3.21 | 16.42 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078C2A6 | EnsemblPlants:CDX69208 | ProteinID:CDX69208 | ProteinID:CDX69208.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00131011001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF107 | SUPFAM:SSF101941 | UniParc:UPI0004EDFBB7 | : | : | : |
Description
BnaC01g02450D
Coordinates
chrLK031789:-:3457641..3460494
Molecular Weight (calculated)
39661.4 Da
IEP (calculated)
6.330
GRAVY (calculated)
-0.879
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MESVDQSCSV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIRDIDLYRI EPWDLQEKCR IGYEERNEWY FFSHKDKKYP TGTRTNRATI AGFWKATGRD
101: KAVYDKSKLI GMRKTLVFYK GRAPNGQKTD WIMHEYRLES DENAPPQEEG WVVCRAFKKK PTTGQAKNTE TWRSSYFYDE LPSGVGSAME PLDYVSKQKQ
201: NIFAQDVLFK QELEGPMSST SITSSEKIHN KHKRPLIEED ELINSQNKVK RKRTSVVTTD WRALDKFVAS QLMSQEDGVL DFGGHKEDDS KNTGHCNNEV
301: SINNNGTEMA SSSLLSDREE ENRFISGFLC TNLDDDLYRD LHV
101: KAVYDKSKLI GMRKTLVFYK GRAPNGQKTD WIMHEYRLES DENAPPQEEG WVVCRAFKKK PTTGQAKNTE TWRSSYFYDE LPSGVGSAME PLDYVSKQKQ
201: NIFAQDVLFK QELEGPMSST SITSSEKIHN KHKRPLIEED ELINSQNKVK RKRTSVVTTD WRALDKFVAS QLMSQEDGVL DFGGHKEDDS KNTGHCNNEV
301: SINNNGTEMA SSSLLSDREE ENRFISGFLC TNLDDDLYRD LHV
001: MESVDQSCSV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIRDIDLYRI EPWDLQESCR IGYEERNEWY FFSHKDKKYP TGTRTNRATM AGFWKATGRD
101: KAVYDKSKLI GMRKTLVFYK GRAPNGQKTD WIMHEYRLES DENAPPQEEG WVVCRAFKKK PMTGQAKNTE TWSSSYFYDE LPSGVRSVTE PLNYVSKQKQ
201: NVFAQDLMFK QELEGSDIGL NFIHCDQFIQ LPQLESPSLP LTKRPVSLTS ITSLEKNKNI YKRHLIEEDV SFNALISSGN KDKKKKKTSV MTTDWRALDK
301: FVASQLMSQE DGVSGFGGHH EEDNNKIGHY NNEESNNKGS VETASSTLLS DREEENRFIS GLLCSNLDYD LYRDLHV
101: KAVYDKSKLI GMRKTLVFYK GRAPNGQKTD WIMHEYRLES DENAPPQEEG WVVCRAFKKK PMTGQAKNTE TWSSSYFYDE LPSGVRSVTE PLNYVSKQKQ
201: NVFAQDLMFK QELEGSDIGL NFIHCDQFIQ LPQLESPSLP LTKRPVSLTS ITSLEKNKNI YKRHLIEEDV SFNALISSGN KDKKKKKTSV MTTDWRALDK
301: FVASQLMSQE DGVSGFGGHH EEDNNKIGHY NNEESNNKGS VETASSTLLS DREEENRFIS GLLCSNLDYD LYRDLHV
Arabidopsis Description
ANAC076NAC domain containing protein 76 [Source:TAIR;Acc:AT4G36160]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.