Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010183.1-P | Field mustard | nucleus | 90.46 | 95.45 |
| CDY26917 | Canola | nucleus | 90.46 | 95.45 |
| HORVU7Hr1G012740.1 | Barley | cytosol, nucleus, plastid | 15.69 | 80.95 |
| CDY72666 | Canola | nucleus | 38.77 | 77.3 |
| AT1G32770.1 | Thale cress | nucleus | 80.62 | 73.18 |
| CDX93819 | Canola | nucleus | 81.54 | 72.8 |
| CDY01243 | Canola | nucleus | 81.85 | 71.7 |
| CDY70728 | Canola | nucleus | 37.85 | 68.72 |
| CDY35029 | Canola | cytosol | 42.15 | 65.87 |
| CDX69209 | Canola | cytosol, mitochondrion, nucleus | 31.69 | 64.78 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 39.08 | 63.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.62 | 56.86 |
| Os08t0115800-01 | Rice | nucleus | 42.77 | 54.94 |
| CDY62781 | Canola | nucleus | 23.69 | 48.73 |
| GSMUA_Achr3P12230_001 | Banana | nucleus | 50.77 | 48.67 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 48.0 | 48.45 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 49.23 | 48.19 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 37.54 | 47.84 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 47.38 | 47.24 |
| CDX80045 | Canola | nucleus | 51.69 | 46.8 |
| CDY41554 | Canola | nucleus | 51.38 | 46.78 |
| CDX67870 | Canola | nucleus | 48.31 | 46.73 |
| CDY27524 | Canola | nucleus | 52.0 | 46.43 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 57.54 | 46.17 |
| GSMUA_Achr9P24450_001 | Banana | nucleus | 48.62 | 45.01 |
| Zm00001d049678_P001 | Maize | nucleus | 50.15 | 43.01 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 46.77 | 41.42 |
| HORVU7Hr1G075550.1 | Barley | cytosol, nucleus, plastid | 50.15 | 40.95 |
| TraesCS7D01G062600.1 | Wheat | cytosol, nucleus, plastid | 49.23 | 40.51 |
| TraesCS7D01G314000.2 | Wheat | nucleus | 51.08 | 40.49 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 51.08 | 40.49 |
| Os06t0131700-01 | Rice | nucleus | 48.92 | 40.25 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 48.92 | 39.95 |
| CDY05099 | Canola | nucleus | 40.92 | 39.94 |
| CDX90756 | Canola | nucleus | 40.62 | 39.76 |
| CDY00280 | Canola | nucleus | 31.69 | 39.62 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 48.0 | 39.59 |
| TraesCS7D01G062100.1 | Wheat | cytosol, nucleus, plastid | 49.85 | 39.51 |
| Zm00001d035084_P001 | Maize | nucleus | 50.77 | 39.47 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 49.85 | 39.42 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 48.62 | 39.4 |
| KXG24274 | Sorghum | nucleus | 50.77 | 39.38 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 48.31 | 39.35 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 49.23 | 39.22 |
| TraesCS7D01G062400.1 | Wheat | nucleus | 48.62 | 39.11 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 49.85 | 39.04 |
| TraesCS7D01G062300.1 | Wheat | cytosol, nucleus, plastid | 49.23 | 38.93 |
| CDY30778 | Canola | nucleus | 35.08 | 38.64 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 46.15 | 38.56 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 48.62 | 38.54 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 48.0 | 38.52 |
| TraesCS7D01G063300.1 | Wheat | cytosol, nucleus, plastid | 47.69 | 38.46 |
| CDY45221 | Canola | nucleus | 34.77 | 38.44 |
| CDY22285 | Canola | nucleus | 40.92 | 38.33 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 48.31 | 38.2 |
| CDX98078 | Canola | nucleus | 39.38 | 37.87 |
| CDY71976 | Canola | nucleus | 40.31 | 37.54 |
| CDY15987 | Canola | nucleus | 39.08 | 37.46 |
| CDY26551 | Canola | nucleus | 39.08 | 37.35 |
| CDY47055 | Canola | nucleus | 37.54 | 37.31 |
| CDX87372 | Canola | nucleus | 41.23 | 37.22 |
| CDY70056 | Canola | nucleus | 40.62 | 36.97 |
| CDX88550 | Canola | nucleus | 41.23 | 36.91 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 48.31 | 36.68 |
| CDX69208 | Canola | nucleus | 38.46 | 36.44 |
| CDX75558 | Canola | nucleus | 38.15 | 36.15 |
| CDX72580 | Canola | nucleus | 37.54 | 35.99 |
| CDY21041 | Canola | nucleus | 39.08 | 35.98 |
| HORVU7Hr1G012780.1 | Barley | nucleus | 49.23 | 35.71 |
| CDX96362 | Canola | nucleus | 35.69 | 35.69 |
| CDX72846 | Canola | nucleus | 35.69 | 35.69 |
| CDY31249 | Canola | nucleus | 39.38 | 35.07 |
| CDY03671 | Canola | nucleus | 35.08 | 34.86 |
| CDX82202 | Canola | nucleus | 35.08 | 34.86 |
| CDY46914 | Canola | nucleus | 38.15 | 34.35 |
| CDY31835 | Canola | nucleus | 38.15 | 34.35 |
| CDY38177 | Canola | nucleus | 37.85 | 34.07 |
| CDY16776 | Canola | nucleus | 34.77 | 34.04 |
| CDX87246 | Canola | nucleus | 35.08 | 33.93 |
| HORVU7Hr1G012760.6 | Barley | plastid | 47.69 | 33.84 |
| CDY58006 | Canola | nucleus | 35.08 | 32.76 |
| CDY30057 | Canola | nucleus | 39.38 | 32.49 |
| CDY30716 | Canola | nucleus | 35.08 | 31.58 |
| Zm00001d045463_P001 | Maize | nucleus | 48.92 | 30.81 |
| CDY00281 | Canola | cytosol | 2.46 | 11.94 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078C8T5 | EnsemblPlants:CDX73267 | ProteinID:CDX73267 | ProteinID:CDX73267.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00106315001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF45 | SUPFAM:SSF101941 | UniParc:UPI0004EE1D65 | SEG:seg | : | : |
Description
BnaC05g28390D
Coordinates
chrLK031798:-:426414..428559
Molecular Weight (calculated)
37899.6 Da
IEP (calculated)
6.750
GRAVY (calculated)
-0.677
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENNVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVHS QKIDLDVIRE VDLNKLEPWD IQEECRIGLT PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIY SCVRRIGLRK TLVFYKGRAP HGEKSEWIMH EYRLDDTPTS NVSVAIINKH WITKLIENIQ GIFFQLGHMI YNEDGWVVCR VFRKKNYQKI
201: DDSPKITLFS SPDDTDENRR PTTFHNTLNA TVLDHVLLCM DRSEKITGRP GCSNWASLDR LVAWQLNNGH HTCDRTSFDE EEDGDAMMQR WDLHWNNEDN
301: VDIWSSFAES SSSPSSLDPL LHLSV
101: KATGRDKIIY SCVRRIGLRK TLVFYKGRAP HGEKSEWIMH EYRLDDTPTS NVSVAIINKH WITKLIENIQ GIFFQLGHMI YNEDGWVVCR VFRKKNYQKI
201: DDSPKITLFS SPDDTDENRR PTTFHNTLNA TVLDHVLLCM DRSEKITGRP GCSNWASLDR LVAWQLNNGH HTCDRTSFDE EEDGDAMMQR WDLHWNNEDN
301: VDIWSSFAES SSSPSSLDPL LHLSV
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.