Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G420100.1 | Wheat | nucleus | 87.83 | 88.05 |
| TraesCS4A01G420200.1 | Wheat | nucleus | 85.64 | 86.27 |
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 81.75 | 85.28 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 82.0 | 84.04 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 40.63 | 83.92 |
| TraesCS7D01G062600.1 | Wheat | cytosol, nucleus, plastid | 79.32 | 82.53 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 50.12 | 80.78 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 76.4 | 80.72 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 78.1 | 80.65 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 77.37 | 78.52 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 74.45 | 76.69 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 74.21 | 74.21 |
| CDY72666 | Canola | nucleus | 29.2 | 73.62 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 72.26 | 71.57 |
| HORVU7Hr1G012780.1 | Barley | nucleus | 72.99 | 66.96 |
| HORVU7Hr1G012760.6 | Barley | plastid | 74.45 | 66.81 |
| CDY35029 | Canola | cytosol | 30.66 | 60.58 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 53.77 | 60.22 |
| Os06t0131700-01 | Rice | nucleus | 57.18 | 59.49 |
| KRG97235 | Soybean | nucleus | 36.25 | 56.23 |
| Solyc10g005010.2.1 | Tomato | nucleus | 38.93 | 55.75 |
| KRG97237 | Soybean | nucleus | 35.77 | 55.47 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 57.42 | 55.14 |
| PGSC0003DMT400029321 | Potato | nucleus | 41.85 | 54.95 |
| CDY26917 | Canola | nucleus | 38.44 | 51.3 |
| Bra010183.1-P | Field mustard | nucleus | 38.44 | 51.3 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 45.99 | 48.96 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 38.2 | 48.76 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 38.2 | 48.76 |
| CDX73267 | Canola | cytosol | 38.2 | 48.31 |
| PGSC0003DMT400014872 | Potato | nucleus | 40.88 | 48.28 |
| AT2G46770.1 | Thale cress | nucleus | 42.82 | 48.22 |
| CDX80045 | Canola | nucleus | 41.85 | 47.91 |
| CDY41554 | Canola | nucleus | 41.61 | 47.9 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 38.69 | 47.89 |
| Solyc08g008660.2.1 | Tomato | nucleus | 40.63 | 47.85 |
| Bra004509.1-P | Field mustard | nucleus | 41.61 | 47.63 |
| AT3G61910.1 | Thale cress | nucleus | 38.69 | 47.6 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 37.71 | 47.55 |
| PGSC0003DMT400031571 | Potato | nucleus | 42.09 | 46.76 |
| Bra003478.1-P | Field mustard | nucleus | 38.2 | 46.73 |
| CDX67870 | Canola | nucleus | 38.2 | 46.73 |
| CDY27524 | Canola | nucleus | 41.12 | 46.43 |
| Bra040486.1-P | Field mustard | nucleus | 41.12 | 46.43 |
| CDX93819 | Canola | nucleus | 40.88 | 46.15 |
| Bra023288.1-P | Field mustard | nucleus | 40.88 | 46.15 |
| AT1G32770.1 | Thale cress | nucleus | 40.15 | 46.09 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 45.74 | 45.85 |
| CDY01243 | Canola | nucleus | 41.36 | 45.82 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 22.38 | 45.54 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 44.04 | 44.69 |
| KRH47818 | Soybean | nucleus | 42.58 | 43.75 |
| Zm00001d045463_P001 | Maize | nucleus | 54.01 | 43.02 |
| KRH06383 | Soybean | nucleus | 44.77 | 41.53 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 27.74 | 40.71 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 33.09 | 40.48 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 36.01 | 40.22 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 32.36 | 39.23 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 31.87 | 38.99 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 31.87 | 38.99 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 32.6 | 38.07 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 27.25 | 37.58 |
| TraesCS5A01G491700.1 | Wheat | cytosol, mitochondrion, nucleus | 32.85 | 36.78 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 27.01 | 36.39 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 27.98 | 36.05 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 27.25 | 35.9 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 27.49 | 34.88 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF39 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS4A01G421000 | EnsemblPlants:TraesCS4A01G421000.1 | SEG:seg |
Description
No Description!
Coordinates
chr4A:+:691166275..691169394
Molecular Weight (calculated)
44919.6 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.473
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISVNGHSV VPPGFRFHPT EEELLTYYLA KKVASQPIDL DVIPDVDLNK LEPWDIQERC RIGTGPQNDW YLFSHKDKKY STGTRTNRAT AAGFWKATGR
101: DKAIYSAAGS GRIGMRKTLV FYKGRAPHGH KSDWIMHEYR LDDAVAPVTN PVFAAGDASS YYSGISSPVH GVARDQSSSA QEDGWVICRV FKKKNIVVQH
201: QAGQNRGGGV ASNKLVGAGA MEHSQSNCSS TVTAASEKAK EQMHQQQHLP HSDDALDHIL SYMGRSSIAS CKQETKPANP SSSALDHLIN NVCHNGTSTL
301: YDKFMKLPPL EHVIPGGLLP RPSEYSSDWE ALERLAAYEL NGLSNPTLDE TTNDMSYIAD ELGGATSYSR DGTLHIPSVT GSDDGDLWSL ARPVSSLHVE
401: LTMAWFKAIG C
101: DKAIYSAAGS GRIGMRKTLV FYKGRAPHGH KSDWIMHEYR LDDAVAPVTN PVFAAGDASS YYSGISSPVH GVARDQSSSA QEDGWVICRV FKKKNIVVQH
201: QAGQNRGGGV ASNKLVGAGA MEHSQSNCSS TVTAASEKAK EQMHQQQHLP HSDDALDHIL SYMGRSSIAS CKQETKPANP SSSALDHLIN NVCHNGTSTL
301: YDKFMKLPPL EHVIPGGLLP RPSEYSSDWE ALERLAAYEL NGLSNPTLDE TTNDMSYIAD ELGGATSYSR DGTLHIPSVT GSDDGDLWSL ARPVSSLHVE
401: LTMAWFKAIG C
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.