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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G386300.1
TraesCS2B01G403300.1
TraesCS2D01G382800.1
TraesCS4A01G486200.1
TraesCS6A01G237900.1
TraesCS6B01G286200.1
TraesCS6D01G220600.1
TraesCS7A01G008800.1
TraesCS7D01G008500.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G62380.1 TraesCS2A01G386300.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS2B01G403300.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS2D01G382800.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS4A01G486200.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS6A01G237900.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS6B01G286200.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS6D01G220600.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS7A01G008800.1 AT5G62380.1 18445131
AT5G62380.1 TraesCS7D01G008500.1 AT5G62380.1 18445131
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G220600.1 Wheat nucleus 98.58 98.58
HORVU6Hr1G060800.3 Barley nucleus 92.33 91.29
TraesCS6B01G286200.1 Wheat cytosol 92.9 85.83
PGSC0003DMT400055552 Potato cytosol, nucleus, peroxisome 33.24 79.05
Zm00001d051294_P001 Maize cytosol 39.2 78.86
Zm00001d017396_P001 Maize nucleus 46.59 77.0
KXG31125 Sorghum nucleus 75.57 76.66
Os02t0643600-00 Rice nucleus 78.69 74.86
TraesCS2A01G386300.1 Wheat cytosol, nucleus, peroxisome 62.78 65.19
GSMUA_Achr11P... Banana nucleus 59.09 59.09
KRH23801 Soybean nucleus 57.1 57.93
TraesCS7A01G008800.1 Wheat nucleus 55.11 57.74
TraesCS4A01G486200.1 Wheat nucleus 54.83 57.44
KRH62610 Soybean nucleus 55.11 56.89
KRH39986 Soybean nucleus 56.82 56.5
VIT_16s0022g00690.t01 Wine grape cytosol, nucleus, peroxisome 57.39 56.27
TraesCS7A01G068200.1 Wheat cytosol, nucleus, plastid 31.25 55.28
KRH56355 Soybean nucleus 55.4 53.72
Solyc03g083880.2.1 Tomato nucleus 46.59 52.56
Solyc06g034340.1.1 Tomato nucleus 50.57 52.35
CDY00280 Canola nucleus 38.35 51.92
TraesCS2A01G565900.1 Wheat cytosol, nucleus, plastid 27.84 48.51
CDY16776 Canola nucleus 43.18 45.78
AT5G62380.1 Thale cress nucleus 45.17 45.69
Bra035896.1-P Field mustard nucleus 42.9 45.48
Bra010077.1-P Field mustard nucleus 44.32 44.96
CDY58006 Canola nucleus 44.32 44.83
CDX87246 Canola nucleus 42.61 44.64
CDY30716 Canola nucleus 45.74 44.6
Bra029266.1-P Field mustard nucleus 45.45 43.96
TraesCS2A01G566400.1 Wheat nucleus 34.94 43.93
TraesCS2A01G566000.1 Wheat nucleus 35.8 42.28
TraesCS5A01G491700.1 Wheat cytosol, mitochondrion, nucleus 44.03 42.23
TraesCS2A01G566200.1 Wheat nucleus 36.36 41.97
TraesCS2A01G566100.1 Wheat nucleus 36.36 40.13
TraesCS7A01G326000.1 Wheat nucleus 34.09 38.46
TraesCS2A01G311500.1 Wheat nucleus 36.36 38.1
TraesCS2A01G566300.1 Wheat nucleus 34.66 37.65
TraesCS7A01G349500.1 Wheat nucleus 38.64 36.96
Bra029264.1-P Field mustard nucleus 31.53 36.51
TraesCS7A01G317100.1 Wheat nucleus 42.33 36.34
TraesCS7A01G068300.1 Wheat cytosol, nucleus, plastid 39.49 34.92
TraesCS4A01G421200.1 Wheat nucleus 40.06 34.81
TraesCS4A01G421100.1 Wheat nucleus 39.2 34.59
TraesCS4A01G420900.1 Wheat cytosol, nucleus, plastid 38.92 34.16
TraesCS7A01G068000.1 Wheat cytosol, nucleus, plastid 39.77 34.06
TraesCS4A01G420200.1 Wheat nucleus 38.92 33.58
TraesCS4A01G420000.1 Wheat cytosol, nucleus, plastid 37.5 33.5
TraesCS4A01G421300.1 Wheat cytosol, nucleus, plastid 39.49 33.49
TraesCS4A01G419900.1 Wheat nucleus 36.93 33.42
TraesCS4A01G420100.1 Wheat nucleus 38.64 33.17
TraesCS4A01G421000.1 Wheat nucleus 38.07 32.6
CDY00281 Canola cytosol 4.83 25.37
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005
PANTHER:PTHR31989PANTHER:PTHR31989:SF3SUPFAM:SSF101941EnsemblPlantsGene:TraesCS6A01G237900EnsemblPlants:TraesCS6A01G237900.1SEG:seg
Description
No Description!
Coordinates
chr6A:-:447177944..447179191
Molecular Weight (calculated)
40190.9 Da
IEP (calculated)
7.251
GRAVY (calculated)
-0.830
Length
352 amino acids
Sequence
(BLAST)
001: MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKKIDLDVIK DVDLYKIEPW DLQDKCKIGM EEQNDWYFFS HKDKKYPTGT RTNRATSAGF WKATGRDKPI
101: YTNHCLVGMR KTLVFYKGRA PNGQKSNWIM HEYRLETNEN GATPEEGWVV CRVFKKRVAT VRRMADMNSP CWFDDHGAGG GFMPDLDSPR QLGYQHHHPQ
201: NLAPYHSQQQ QQYHCKPELE YHHLLPQEAF MQQLPHLESP KPTTAYIGHG SSGGILSSTS NHPLAHDGPS RFAAQQPPMD HALYTGESSA TDWRYLDKFV
301: ASQLFSHDGT NPKEQATHSN AAVQVFQAEN KHEEALDYAS TSAGLGSAHL WK
Best Arabidopsis Sequence Match ( AT1G12260.1 )
(BLAST)
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK
Arabidopsis Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.