Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G486200.1 | Wheat | nucleus | 99.4 | 99.4 |
| HORVU7Hr1G000140.6 | Barley | nucleus | 92.26 | 88.83 |
| OQU75680 | Sorghum | nucleus | 86.01 | 85.25 |
| PGSC0003DMT400055552 | Potato | cytosol, nucleus, peroxisome | 37.2 | 84.46 |
| Zm00001d045600_P001 | Maize | nucleus | 32.44 | 78.42 |
| Os06t0104200-01 | Rice | nucleus | 67.26 | 62.09 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 61.9 | 61.18 |
| KRH23801 | Soybean | nucleus | 60.71 | 58.79 |
| KRH39986 | Soybean | nucleus | 60.42 | 57.34 |
| KRH62610 | Soybean | nucleus | 57.44 | 56.6 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 60.42 | 56.55 |
| Solyc06g034340.1.1 | Tomato | nucleus | 55.95 | 55.29 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 57.74 | 55.11 |
| Solyc03g083880.2.1 | Tomato | nucleus | 50.89 | 54.81 |
| KRH56355 | Soybean | nucleus | 58.63 | 54.27 |
| TraesCS2D01G382800.1 | Wheat | cytosol, nucleus, peroxisome | 53.27 | 52.8 |
| CDY00280 | Canola | nucleus | 40.18 | 51.92 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 56.55 | 51.49 |
| CDY16776 | Canola | nucleus | 46.43 | 46.99 |
| Bra035896.1-P | Field mustard | nucleus | 46.13 | 46.69 |
| AT5G62380.1 | Thale cress | nucleus | 47.92 | 46.26 |
| CDX87246 | Canola | nucleus | 45.83 | 45.83 |
| CDY58006 | Canola | nucleus | 47.32 | 45.69 |
| Bra010077.1-P | Field mustard | nucleus | 47.02 | 45.53 |
| CDY30716 | Canola | nucleus | 47.32 | 44.04 |
| Bra029266.1-P | Field mustard | nucleus | 47.02 | 43.41 |
| TraesCS4D01G316800.1 | Wheat | nucleus | 45.83 | 41.96 |
| TraesCS2D01G576300.1 | Wheat | cytosol, mitochondrion, nucleus | 38.99 | 41.59 |
| TraesCS2D01G576500.2 | Wheat | nucleus | 38.69 | 41.14 |
| TraesCS2D01G576400.1 | Wheat | nucleus | 37.2 | 40.98 |
| TraesCS2D01G576200.1 | Wheat | nucleus | 38.39 | 40.69 |
| TraesCS7D01G322700.1 | Wheat | nucleus | 35.71 | 38.46 |
| TraesCS7D01G329200.1 | Wheat | nucleus | 41.07 | 37.5 |
| Bra029264.1-P | Field mustard | nucleus | 33.33 | 36.84 |
| TraesCS2D01G309800.1 | Wheat | nucleus | 35.71 | 35.71 |
| TraesCS7D01G314000.2 | Wheat | nucleus | 43.15 | 35.37 |
| TraesCS7D01G062600.1 | Wheat | cytosol, nucleus, plastid | 40.18 | 34.18 |
| TraesCS7D01G063300.1 | Wheat | cytosol, nucleus, plastid | 40.18 | 33.5 |
| TraesCS7D01G062100.1 | Wheat | cytosol, nucleus, plastid | 40.18 | 32.93 |
| TraesCS7D01G062300.1 | Wheat | cytosol, nucleus, plastid | 40.18 | 32.85 |
| TraesCS7D01G062400.1 | Wheat | nucleus | 39.29 | 32.67 |
| CDY00281 | Canola | cytosol | 5.36 | 26.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF105 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS7D01G008500 | EnsemblPlants:TraesCS7D01G008500.1 | SEG:seg |
Description
No Description!
Coordinates
chr7D:-:4024888..4029256
Molecular Weight (calculated)
39013.7 Da
IEP (calculated)
6.743
GRAVY (calculated)
-0.879
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNTQPQVP PGFRFHPTDE ELVDYYLRKK VASRRIDLNV IKDVDLYKIE PWDLQEKCRI GPEEEQSDWY FFSHKDKKYP TGTRTNRATA AGFWKATGRD
101: KPIYAKHCLV GMRKTLVYYK GRAPNGQKSD WIMHEYRLET NENGPPQEEG WVVCRVFKKR LPTTRRDLDH DAPCWYIDDD GPFMHDLNSP MRGMPPHHSM
201: ALQEQHLQML NSTYKRELKL QYQMPNHHHV LNTIPHELES PSSFHSLLVS PDDHQINVHH AQHHHVQLID HAVDDQAATD WRVLDKFVAS QLSNDAAKGV
301: DYAHEGDILQ LNEKAQELAT DYASTSTSSS QVDPWK
101: KPIYAKHCLV GMRKTLVYYK GRAPNGQKSD WIMHEYRLET NENGPPQEEG WVVCRVFKKR LPTTRRDLDH DAPCWYIDDD GPFMHDLNSP MRGMPPHHSM
201: ALQEQHLQML NSTYKRELKL QYQMPNHHHV LNTIPHELES PSSFHSLLVS PDDHQINVHH AQHHHVQLID HAVDDQAATD WRVLDKFVAS QLSNDAAKGV
301: DYAHEGDILQ LNEKAQELAT DYASTSTSSS QVDPWK
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQLSNEE AATASASIQN
301: NAKDTSNAEY QVDEEKDPKR ASDMGEEYTA STSSSCQIDL WK
Arabidopsis Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.