Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G566100.1 | Wheat | nucleus | 93.11 | 89.03 |
| TraesCS2D01G576300.1 | Wheat | cytosol, mitochondrion, nucleus | 90.16 | 87.3 |
| HORVU2Hr1G126080.3 | Barley | nucleus | 89.18 | 85.0 |
| HORVU2Hr1G126040.14 | Barley | nucleus | 88.52 | 84.64 |
| TraesCS2D01G576200.1 | Wheat | nucleus | 84.92 | 81.7 |
| TraesCS2D01G576500.2 | Wheat | nucleus | 81.97 | 79.11 |
| TraesCS7D01G322700.1 | Wheat | nucleus | 56.07 | 54.81 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 52.13 | 52.65 |
| Os08t0103900-01 | Rice | nucleus | 55.41 | 52.16 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 42.3 | 51.81 |
| VIT_18s0072g01060.t01 | Wine grape | nucleus | 48.52 | 47.28 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 41.97 | 44.76 |
| Solyc06g065410.2.1 | Tomato | nucleus | 47.21 | 44.72 |
| Solyc11g018660.1.1 | Tomato | nucleus | 45.57 | 44.69 |
| PGSC0003DMT400002318 | Potato | nucleus | 46.23 | 44.62 |
| PGSC0003DMT400067086 | Potato | nucleus | 47.21 | 43.77 |
| AT1G71930.2 | Thale cress | nucleus | 45.9 | 43.21 |
| CDX72846 | Canola | nucleus | 45.57 | 42.77 |
| CDX96362 | Canola | nucleus | 45.57 | 42.77 |
| Bra016098.1-P | Field mustard | nucleus | 45.25 | 42.72 |
| Bra007996.1-P | Field mustard | nucleus | 45.25 | 42.2 |
| CDX82202 | Canola | nucleus | 45.25 | 42.2 |
| CDY03671 | Canola | nucleus | 45.25 | 42.2 |
| KRG91808 | Soybean | nucleus | 46.56 | 41.64 |
| KRH34977 | Soybean | nucleus | 46.89 | 41.33 |
| TraesCS4D01G316800.1 | Wheat | nucleus | 47.21 | 39.24 |
| TraesCS7D01G008500.1 | Wheat | nucleus | 40.98 | 37.2 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 41.97 | 36.36 |
| TraesCS2D01G382800.1 | Wheat | cytosol, nucleus, peroxisome | 38.69 | 34.81 |
| TraesCS2D01G309800.1 | Wheat | nucleus | 37.7 | 34.23 |
| TraesCS7D01G329200.1 | Wheat | nucleus | 37.7 | 31.25 |
| TraesCS7D01G062600.1 | Wheat | cytosol, nucleus, plastid | 37.38 | 28.86 |
| TraesCS7D01G062400.1 | Wheat | nucleus | 37.38 | 28.22 |
| TraesCS7D01G062100.1 | Wheat | cytosol, nucleus, plastid | 37.7 | 28.05 |
| TraesCS7D01G062300.1 | Wheat | cytosol, nucleus, plastid | 37.38 | 27.74 |
| TraesCS7D01G314000.2 | Wheat | nucleus | 37.05 | 27.56 |
| TraesCS7D01G063300.1 | Wheat | cytosol, nucleus, plastid | 36.07 | 27.3 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF103 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS2D01G576400 | EnsemblPlants:TraesCS2D01G576400.1 | SEG:seg |
Description
No Description!
Coordinates
chr2D:-:639820725..639821858
Molecular Weight (calculated)
33694.3 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.574
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAMDQHNHQ EESCVPPGFR FHPTEEELVG YYLARKVAAQ KIDLDIIQEV DLYRIEPWDL QERCGGGRGG RGARQVAAED EQSSEWYFFS FKDRKYPSGT
101: RTNRATAAGF WKATGRDKPV TSSSSRGVIG MRKTLVFYRG RAPNGRKTDW IIHEYRLQTS EHAPTQEEGW VVCRAFQKPT PNQRPSYIFP AYAAAPGLGG
201: YYEARPWLHG QGGDLHYLQS ATCAAGAGGL GFPGQGIQYS DDLLESKQSL FGNIPQLIES PPTTTAVAGG GDAGYDVVQQ GQAAAGIDWN FLDSLLSTSQ
301: LHLQQ
101: RTNRATAAGF WKATGRDKPV TSSSSRGVIG MRKTLVFYRG RAPNGRKTDW IIHEYRLQTS EHAPTQEEGW VVCRAFQKPT PNQRPSYIFP AYAAAPGLGG
201: YYEARPWLHG QGGDLHYLQS ATCAAGAGGL GFPGQGIQYS DDLLESKQSL FGNIPQLIES PPTTTAVAGG GDAGYDVVQQ GQAAAGIDWN FLDSLLSTSQ
301: LHLQQ
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Arabidopsis Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.