Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96362 | Canola | nucleus | 93.83 | 93.54 |
| Bra016098.1-P | Field mustard | nucleus | 92.59 | 92.88 |
| CDX72846 | Canola | nucleus | 92.28 | 92.0 |
| CDY03671 | Canola | nucleus | 89.2 | 88.38 |
| Bra007996.1-P | Field mustard | nucleus | 89.2 | 88.38 |
| CDX82202 | Canola | nucleus | 88.89 | 88.07 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 35.8 | 57.43 |
| VIT_18s0072g01060.t01 | Wine grape | nucleus | 54.32 | 56.23 |
| Solyc06g065410.2.1 | Tomato | nucleus | 54.94 | 55.28 |
| PGSC0003DMT400067086 | Potato | nucleus | 55.25 | 54.41 |
| PGSC0003DMT400002318 | Potato | nucleus | 52.78 | 54.11 |
| Solyc11g018660.1.1 | Tomato | nucleus | 51.54 | 53.7 |
| KRG91808 | Soybean | nucleus | 54.63 | 51.91 |
| KRH34977 | Soybean | nucleus | 55.25 | 51.73 |
| GSMUA_Achr6P18860_001 | Banana | cytosol, nucleus, plastid | 39.51 | 49.81 |
| GSMUA_Achr3P22360_001 | Banana | nucleus | 44.44 | 47.68 |
| Zm00001d034984_P001 | Maize | nucleus | 40.74 | 47.65 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 41.05 | 47.5 |
| GSMUA_Achr7P23170_001 | Banana | nucleus | 35.8 | 46.59 |
| TraesCS2D01G576400.1 | Wheat | nucleus | 43.21 | 45.9 |
| TraesCS2B01G627000.1 | Wheat | nucleus | 41.98 | 45.33 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 41.67 | 45.3 |
| AT5G66300.1 | Thale cress | nucleus | 40.43 | 44.86 |
| Zm00001d050039_P001 | Maize | nucleus | 40.74 | 44.75 |
| TraesCS2D01G576300.1 | Wheat | cytosol, mitochondrion, nucleus | 42.9 | 44.13 |
| TraesCS2B01G627100.1 | Wheat | nucleus | 42.59 | 43.95 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 41.36 | 43.93 |
| TraesCS2D01G576500.2 | Wheat | nucleus | 42.59 | 43.67 |
| Zm00001d002934_P001 | Maize | nucleus | 44.14 | 43.6 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 42.9 | 43.57 |
| TraesCS2D01G576200.1 | Wheat | nucleus | 42.59 | 43.53 |
| Os08t0103900-01 | Rice | nucleus | 43.52 | 43.52 |
| HORVU2Hr1G126080.3 | Barley | nucleus | 42.9 | 43.44 |
| TraesCS7B01G226600.1 | Wheat | nucleus | 41.36 | 42.95 |
| TraesCS7D01G322700.1 | Wheat | nucleus | 41.36 | 42.95 |
| TraesCS2B01G627200.1 | Wheat | nucleus | 41.98 | 42.9 |
| EES13158 | Sorghum | nucleus | 43.83 | 42.64 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 41.05 | 42.63 |
| EES14359 | Sorghum | nucleus | 43.83 | 42.39 |
| AT2G18060.1 | Thale cress | nucleus | 46.6 | 41.37 |
| HORVU2Hr1G126040.14 | Barley | nucleus | 39.81 | 40.44 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 40.12 | 40.12 |
| AT4G36160.2 | Thale cress | nucleus | 45.68 | 38.85 |
| Os04t0691300-00 | Rice | cytosol, nucleus | 32.41 | 36.71 |
| AT3G61910.1 | Thale cress | nucleus | 37.04 | 35.93 |
| AT5G62380.1 | Thale cress | nucleus | 38.27 | 35.63 |
| AT2G46770.1 | Thale cress | nucleus | 39.81 | 35.34 |
| AT1G62700.1 | Thale cress | nucleus | 42.59 | 35.03 |
| AT1G33280.1 | Thale cress | nucleus | 32.72 | 34.75 |
| AT1G12260.1 | Thale cress | nucleus | 42.28 | 34.68 |
| AT1G32770.1 | Thale cress | nucleus | 37.96 | 34.36 |
| AT4G10350.1 | Thale cress | nucleus | 34.26 | 32.55 |
| AT1G79580.4 | Thale cress | nucleus | 37.04 | 32.34 |
Protein Annotations
Description
NAC030NAC domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8W9]
Coordinates
chr1:+:27074702..27077991
Molecular Weight (calculated)
37428.6 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.832
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
101: AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS
201: SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF
301: PSMHQSYNEV EANIHHSLGC FPDS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.