Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31249 | Canola | nucleus | 85.82 | 92.88 |
| CDY21041 | Canola | nucleus | 82.78 | 92.63 |
| Bra016783.1-P | Field mustard | nucleus | 89.62 | 91.24 |
| CDX98078 | Canola | nucleus | 77.97 | 91.12 |
| CDY15987 | Canola | nucleus | 77.47 | 90.27 |
| CDY26551 | Canola | nucleus | 77.47 | 90.0 |
| Bra026981.1-P | Field mustard | nucleus | 77.47 | 90.0 |
| CDY30057 | Canola | nucleus | 89.62 | 89.85 |
| Bra019750.1-P | Field mustard | nucleus | 88.1 | 88.55 |
| AT1G62700.1 | Thale cress | nucleus | 76.46 | 76.65 |
| VIT_02s0154g00020.t01 | Wine grape | nucleus | 59.49 | 65.83 |
| Solyc08g079120.1.1 | Tomato | cytosol, nucleus, plastid | 48.35 | 62.22 |
| KRH57345 | Soybean | nucleus | 57.22 | 62.09 |
| KRH04074 | Soybean | nucleus | 57.22 | 61.75 |
| PGSC0003DMT400012079 | Potato | nucleus | 43.8 | 58.05 |
| KRH28034 | Soybean | nucleus | 52.41 | 57.5 |
| AT5G66300.1 | Thale cress | nucleus | 39.49 | 53.42 |
| AT2G18060.1 | Thale cress | nucleus | 42.78 | 46.3 |
| AT5G62380.1 | Thale cress | nucleus | 40.51 | 45.98 |
| AT4G36160.2 | Thale cress | nucleus | 43.29 | 44.88 |
| AT3G61910.1 | Thale cress | nucleus | 36.46 | 43.11 |
| AT1G71930.2 | Thale cress | nucleus | 34.68 | 42.28 |
| AT2G46770.1 | Thale cress | nucleus | 37.97 | 41.1 |
| AT1G32770.1 | Thale cress | nucleus | 36.2 | 39.94 |
| AT1G33280.1 | Thale cress | nucleus | 28.61 | 37.05 |
| AT4G10350.1 | Thale cress | nucleus | 30.63 | 35.48 |
| AT1G79580.4 | Thale cress | nucleus | 31.65 | 33.69 |
| Os04t0443801-02 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:837780 | ProteinID:AAG12568.1 | ProteinID:AEE28859.1 | ArrayExpress:AT1G12260 |
| EnsemblPlantsGene:AT1G12260 | RefSeq:AT1G12260 | TAIR:AT1G12260 | RefSeq:AT1G12260-TAIR-G | EnsemblPlants:AT1G12260.1 | TAIR:AT1G12260.1 |
| Unigene:At.43180 | EMBL:BT029761 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0048759 | GO:GO:0071555 | GO:GO:1901348 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | RefSeq:NP_172690.1 | PFAM:PF02365 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0003011 | PO:PO:0005849 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009046 |
| PO:PO:0020100 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF3 |
| UniProt:Q9FWX2 | SUPFAM:SSF101941 | UniParc:UPI0000162D37 | Symbol:VND4 | SEG:seg | : |
Description
NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
Coordinates
chr1:-:4162826..4165928
Molecular Weight (calculated)
45843.0 Da
IEP (calculated)
6.231
GRAVY (calculated)
-0.970
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.