Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra010077.1-P | |
| Bra029264.1-P | |
| Bra029266.1-P | |
| Bra035896.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G62380.1 | Bra010077.1-P | AT5G62380.1 | 18445131 |
| AT5G62380.1 | Bra029264.1-P | AT5G62380.1 | 18445131 |
| AT5G62380.1 | Bra029266.1-P | AT5G62380.1 | 18445131 |
| AT5G62380.1 | Bra035896.1-P | AT5G62380.1 | 18445131 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30716 | Canola | nucleus | 85.2 | 71.75 |
| Bra029266.1-P | Field mustard | nucleus | 85.53 | 71.43 |
| Bra010077.1-P | Field mustard | nucleus | 75.33 | 65.99 |
| AT5G62380.1 | Thale cress | nucleus | 74.67 | 65.23 |
| Bra035896.1-P | Field mustard | nucleus | 69.08 | 63.25 |
| Zm00001d045600_P001 | Maize | nucleus | 22.04 | 48.2 |
| PGSC0003DMT400055552 | Potato | cytosol, nucleus, peroxisome | 22.7 | 46.62 |
| Zm00001d017396_P001 | Maize | nucleus | 30.59 | 43.66 |
| Os04t0536500-01 | Rice | cytosol | 22.7 | 42.59 |
| Zm00001d051294_P001 | Maize | cytosol | 23.68 | 41.14 |
| KRH62610 | Soybean | nucleus | 37.83 | 33.72 |
| Solyc03g083880.2.1 | Tomato | nucleus | 34.54 | 33.65 |
| OQU82026 | Sorghum | nucleus | 37.5 | 33.53 |
| KRH23801 | Soybean | nucleus | 38.16 | 33.43 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 36.84 | 33.33 |
| TraesCS7D01G008500.1 | Wheat | nucleus | 36.84 | 33.33 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 36.84 | 33.33 |
| OQU75680 | Sorghum | nucleus | 36.18 | 32.45 |
| Bra026981.1-P | Field mustard | nucleus | 36.18 | 32.35 |
| KRH56355 | Soybean | nucleus | 37.83 | 31.68 |
| KRH39986 | Soybean | nucleus | 36.84 | 31.64 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 36.51 | 31.53 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 36.51 | 31.53 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 35.2 | 31.47 |
| Zm00001d002828_P001 | Maize | cytosol | 35.53 | 31.4 |
| HORVU6Hr1G060800.3 | Barley | nucleus | 36.51 | 31.18 |
| KXG31125 | Sorghum | nucleus | 35.53 | 31.12 |
| Bra039915.1-P | Field mustard | nucleus | 27.63 | 31.11 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 36.51 | 30.92 |
| GSMUA_Achr11P... | Banana | nucleus | 32.24 | 30.91 |
| HORVU7Hr1G000140.6 | Barley | nucleus | 34.87 | 30.37 |
| Os02t0643600-00 | Rice | nucleus | 36.84 | 30.27 |
| Bra012065.1-P | Field mustard | nucleus | 28.95 | 30.14 |
| GSMUA_Achr11P... | Banana | nucleus | 34.87 | 30.11 |
| HORVU2Hr1G092030.2 | Barley | cytosol, nucleus, peroxisome | 33.55 | 30.09 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 33.55 | 30.09 |
| TraesCS2B01G403300.1 | Wheat | cytosol, nucleus, peroxisome | 33.22 | 29.79 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 30.92 | 29.56 |
| TraesCS2D01G382800.1 | Wheat | cytosol, nucleus, peroxisome | 32.89 | 29.5 |
| TraesCS6B01G286200.1 | Wheat | cytosol | 36.84 | 29.4 |
| Os06t0104200-01 | Rice | nucleus | 34.87 | 29.12 |
| Bra016783.1-P | Field mustard | nucleus | 36.84 | 28.87 |
| Bra027024.1-P | Field mustard | nucleus | 36.84 | 28.57 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 34.54 | 28.46 |
| Bra019750.1-P | Field mustard | nucleus | 36.18 | 27.99 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 28.95 | 27.33 |
| Bra017750.1-P | Field mustard | nucleus | 33.22 | 27.3 |
| Bra011667.1-P | Field mustard | nucleus | 33.22 | 27.22 |
| Bra016098.1-P | Field mustard | nucleus | 28.29 | 26.63 |
| Bra007996.1-P | Field mustard | nucleus | 28.29 | 26.3 |
| Bra003478.1-P | Field mustard | nucleus | 28.95 | 26.19 |
| Bra010183.1-P | Field mustard | nucleus | 25.66 | 25.32 |
| Bra040486.1-P | Field mustard | nucleus | 29.93 | 25.0 |
| Bra004509.1-P | Field mustard | nucleus | 29.28 | 24.79 |
| Bra000709.1-P | Field mustard | nucleus | 26.64 | 23.75 |
| Bra037914.1-P | Field mustard | nucleus | 26.32 | 23.39 |
| Bra035127.1-P | Field mustard | nucleus | 27.3 | 23.12 |
| Bra023288.1-P | Field mustard | nucleus | 27.3 | 22.8 |
| Bra003602.1-P | Field mustard | nucleus | 26.32 | 22.41 |
| Bra008423.1-P | Field mustard | nucleus | 25.66 | 22.35 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EnsemblPlantsGene:Bra029264 | EnsemblPlants:Bra029264.1 | EnsemblPlants:Bra029264.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M4EKE7 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 |
| UniParc:UPI0002545BC4 | SEG:seg | : | : | : | : |
Description
AT5G62380 (E=2e-095) VND6, ANAC101 | ANAC101 (ARABIDOPSIS NAC-DOMAIN PROTEIN 101); transcription activator/ transcription factor/ transcription regulator
Coordinates
chrA02:+:26244448..26245482
Molecular Weight (calculated)
34664.0 Da
IEP (calculated)
5.320
GRAVY (calculated)
-0.888
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MLISTKSSHG TSQTELSGRG TREESEWYFF GHKDKKYPTA TRTNRATGSG FWKATGQDKS IYSTQELVGM RKTFVFYKGR APNGQKFDWI MHEYRLETDE
101: NGPPHEEGWV VCRAFKKKLT TMSYNNPRTL MGSSSGPESN WFTQQMDVAN GSYYHLPDLE SPRMFQGSSS SHYNDNDPYG VVLSTINATS ITLMQGDDEE
201: DHGNIITNDD DDCHIITNDD DHGHFITNDN MIMMNTNTDH HHHHQSGLLL SDDHNVLMMD WQTLDKLVAS QLIMSQEKEE VNIKDPSDNS SNETFIISLK
301: SKQQ
101: NGPPHEEGWV VCRAFKKKLT TMSYNNPRTL MGSSSGPESN WFTQQMDVAN GSYYHLPDLE SPRMFQGSSS SHYNDNDPYG VVLSTINATS ITLMQGDDEE
201: DHGNIITNDD DDCHIITNDD DHGHFITNDN MIMMNTNTDH HHHHQSGLLL SDDHNVLMMD WQTLDKLVAS QLIMSQEKEE VNIKDPSDNS SNETFIISLK
301: SKQQ
001: MESLAHIPPG YRFHPTDEEL VDYYLKNKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT GEEREWYFFS HKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
Arabidopsis Description
NAC101NAC domain-containing protein 101 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.