Factsheet for Os02t0643600-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0643600-00
Os04t0536500-01
Os06t0104200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62380.1	Os02t0643600-00	AT5G62380.1	18445131
AT5G62380.1	Os04t0536500-01	AT5G62380.1	18445131
AT5G62380.1	Os06t0104200-01	AT5G62380.1	18445131

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0536500-01	Rice	cytosol	35.68	81.48
Zm00001d017396_P001	Maize	nucleus	46.49	80.75
PGSC0003DMT400055552	Potato	cytosol, nucleus, peroxisome	32.16	80.41
KXG31125	Sorghum	nucleus	74.86	79.83
Zm00001d051294_P001	Maize	cytosol	37.57	79.43
TraesCS6A01G237900.1	Wheat	nucleus	74.86	78.69
TraesCS6D01G220600.1	Wheat	nucleus	74.86	78.69
HORVU6Hr1G060800.3	Barley	nucleus	75.41	78.37
TraesCS6B01G286200.1	Wheat	cytosol	75.68	73.49
GSMUA_Achr11P...	Banana	nucleus	57.84	60.8
KRH23801	Soybean	nucleus	55.41	59.08
VIT_16s0022g00690.t01	Wine grape	cytosol, nucleus, peroxisome	56.76	58.5
KRH39986	Soybean	nucleus	55.41	57.91
KRH62610	Soybean	nucleus	52.43	56.89
Solyc06g034340.1.1	Tomato	nucleus	50.27	54.71
KRH56355	Soybean	nucleus	52.97	53.99
Solyc03g083880.2.1	Tomato	nucleus	45.41	53.85
CDY00280	Canola	nucleus	37.57	53.46
Os06t0104200-01	Rice	nucleus	50.81	51.65
Os06t0530400-01	Rice	cytosol, nucleus, peroxisome	28.11	51.49
Os08t0115800-01	Rice	nucleus	34.86	50.99
Os10t0532000-01	Rice	cytosol	43.78	47.51
CDY16776	Canola	nucleus	41.62	46.39
AT5G62380.1	Thale cress	nucleus	43.51	46.26
Bra035896.1-P	Field mustard	nucleus	41.35	46.08
CDX87246	Canola	nucleus	41.35	45.54
CDY58006	Canola	nucleus	42.7	45.4
Bra010077.1-P	Field mustard	nucleus	42.43	45.24
CDY30716	Canola	nucleus	43.51	44.6
Bra029266.1-P	Field mustard	nucleus	43.24	43.96
Os08t0103900-01	Rice	nucleus	35.14	40.12
Os02t0252200-01	Rice	nucleus	38.65	39.83
Os06t0131700-01	Rice	nucleus	40.0	37.47
Os04t0691300-00	Rice	cytosol, nucleus	28.92	37.41
Bra029264.1-P	Field mustard	nucleus	30.27	36.84
CDY00281	Canola	cytosol	4.05	22.39
Os04t0443801-02	Rice	mitochondrion	0.0	0.0

Protein Annotations

EntrezGene:107276426	MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:BAD25783.1	ProteinID:BAS80004.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf
EnsemblPlantsGene:Os02g0643600	EnsemblPlants:Os02t0643600-00	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF3
UniProt:Q6H666	SUPFAM:SSF101941	UniParc:UPI00003B4545	RefSeq:XP_015622926.1	SEG:seg	:

Description

NAC DOMAIN-CONTAINING PROTEIN 52Similar to H0502G05.5 protein. (Os02t0643600-00)

Coordinates

chr2:-:25859185..25860990

Molecular Weight (calculated)

41173.3 Da

IEP (calculated)

6.941

GRAVY (calculated)

-0.641

Length

370 amino acids

Sequence
(BLAST)

001: MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKKIDLDVIK DVDLYKIEPW DLQEKCKIGM EEQNDWYFFS HKDKKYPTGT RTNRATGAGF WKATGRDKPI
101: YARSCLVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETNEN GTTPEEGWVV CRVFKKRVAT VRRMADGSPC WFDDHGAVGA FMPDLSSPRQ LLPHHHHHHP
201: GSSAALYHGH HHQQLQQMYG HCKPELEYHH LLPQEAFLQH LPQLESPKPP PPPPAAAAYI GGHLGSSSST ALTTHDDEAS GSAAQQQPPS LEAVYMAGAG
301: VGIGVDASVT DWRLLDKFVA SQLLSKESMS SYGSHPAQVF QAADGGKHEE ALDYASTSAG SGGGEADLWK

Best Arabidopsis Sequence Match ( AT1G12260.1 )
(BLAST)

001: MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI
101: YLRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRRMGDYDSS PSHWYDDQLS FMASELETNG QRRILPNHHQ
201: QQQHEHQQHM PYGLNASAYA LNNPNLQCKQ ELELHYNHLV QRNHLLDESH LSFLQLPQLE SPKIQQDNSN CNSLPYGTSN IDNNSSHNAN LQQSNIAHEE
301: QLNQGNQNFS SLYMNSGNEQ VMDQVTDWRV LDKFVASQLS NEEAATASAS IQNNAKDTSN AEYQVDEEKD PKRASDMGEE YTASTSSSCQ IDLWK

Arabidopsis Description

NAC007NAC domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.