Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra010077.1-P | |
| Bra029264.1-P | |
| Bra029266.1-P | |
| Bra035896.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G62380.1 | Bra010077.1-P | AT5G62380.1 | 18445131 |
| AT5G62380.1 | Bra029264.1-P | AT5G62380.1 | 18445131 |
| AT5G62380.1 | Bra029266.1-P | AT5G62380.1 | 18445131 |
| AT5G62380.1 | Bra035896.1-P | AT5G62380.1 | 18445131 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16776 | Canola | nucleus | 99.7 | 99.7 |
| AT5G62380.1 | Thale cress | nucleus | 86.14 | 82.18 |
| Bra010077.1-P | Field mustard | nucleus | 84.04 | 80.4 |
| Bra029266.1-P | Field mustard | nucleus | 84.04 | 76.65 |
| PGSC0003DMT400055552 | Potato | cytosol, nucleus, peroxisome | 33.43 | 75.0 |
| Bra029264.1-P | Field mustard | nucleus | 63.25 | 69.08 |
| Os04t0536500-01 | Rice | cytosol | 33.43 | 68.52 |
| Zm00001d051294_P001 | Maize | cytosol | 34.94 | 66.29 |
| Zm00001d045600_P001 | Maize | nucleus | 27.11 | 64.75 |
| Solyc03g083880.2.1 | Tomato | nucleus | 44.58 | 47.44 |
| TraesCS7D01G008500.1 | Wheat | nucleus | 46.69 | 46.13 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 46.69 | 46.13 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 46.69 | 46.13 |
| Zm00001d017396_P001 | Maize | nucleus | 29.52 | 46.01 |
| Bra039915.1-P | Field mustard | nucleus | 37.35 | 45.93 |
| OQU75680 | Sorghum | nucleus | 46.39 | 45.43 |
| OQU82026 | Sorghum | nucleus | 46.39 | 45.29 |
| KRH62610 | Soybean | nucleus | 46.08 | 44.87 |
| GSMUA_Achr7P06640_001 | Banana | nucleus | 45.78 | 44.71 |
| Bra026981.1-P | Field mustard | nucleus | 45.18 | 44.12 |
| KRH23801 | Soybean | nucleus | 45.78 | 43.8 |
| Zm00001d002828_P001 | Maize | cytosol | 45.18 | 43.6 |
| KXG31125 | Sorghum | nucleus | 45.48 | 43.52 |
| GSMUA_Achr8P11590_001 | Banana | cytosol | 41.57 | 43.4 |
| KRH56355 | Soybean | nucleus | 47.29 | 43.25 |
| GSMUA_Achr11P... | Banana | nucleus | 41.27 | 43.22 |
| Bra012065.1-P | Field mustard | nucleus | 37.95 | 43.15 |
| TraesCS6D01G220600.1 | Wheat | nucleus | 45.48 | 42.9 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 45.48 | 42.9 |
| VIT_16s0022g00690.t01 | Wine grape | cytosol, nucleus, peroxisome | 46.39 | 42.9 |
| HORVU7Hr1G000140.6 | Barley | nucleus | 44.88 | 42.69 |
| KRH39986 | Soybean | nucleus | 45.48 | 42.66 |
| HORVU6Hr1G060800.3 | Barley | nucleus | 45.48 | 42.42 |
| GSMUA_Achr11P... | Banana | nucleus | 44.88 | 42.33 |
| Os02t0643600-00 | Rice | nucleus | 46.08 | 41.35 |
| HORVU2Hr1G092030.2 | Barley | cytosol, nucleus, peroxisome | 42.17 | 41.3 |
| TraesCS2B01G403300.1 | Wheat | cytosol, nucleus, peroxisome | 41.87 | 41.0 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 41.87 | 41.0 |
| TraesCS2D01G382800.1 | Wheat | cytosol, nucleus, peroxisome | 41.57 | 40.71 |
| Os06t0104200-01 | Rice | nucleus | 43.98 | 40.11 |
| TraesCS6B01G286200.1 | Wheat | cytosol | 45.78 | 39.9 |
| Bra016783.1-P | Field mustard | nucleus | 46.08 | 39.43 |
| GSMUA_Achr6P36840_001 | Banana | nucleus | 43.67 | 39.3 |
| Bra019750.1-P | Field mustard | nucleus | 45.18 | 38.17 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 36.75 | 37.89 |
| Bra011667.1-P | Field mustard | nucleus | 41.87 | 37.47 |
| Bra017750.1-P | Field mustard | nucleus | 41.57 | 37.3 |
| Bra027024.1-P | Field mustard | nucleus | 43.67 | 36.99 |
| Bra010183.1-P | Field mustard | nucleus | 34.04 | 36.69 |
| Bra007996.1-P | Field mustard | nucleus | 35.84 | 36.39 |
| Bra016098.1-P | Field mustard | nucleus | 35.24 | 36.22 |
| Bra003478.1-P | Field mustard | nucleus | 36.14 | 35.71 |
| Bra040486.1-P | Field mustard | nucleus | 39.16 | 35.71 |
| Bra004509.1-P | Field mustard | nucleus | 37.05 | 34.26 |
| Bra037914.1-P | Field mustard | nucleus | 34.64 | 33.63 |
| Bra000709.1-P | Field mustard | nucleus | 34.04 | 33.14 |
| Bra023288.1-P | Field mustard | nucleus | 35.24 | 32.14 |
| Bra035127.1-P | Field mustard | nucleus | 33.13 | 30.64 |
| Bra008423.1-P | Field mustard | nucleus | 31.33 | 29.8 |
| Bra003602.1-P | Field mustard | nucleus | 31.93 | 29.69 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EnsemblPlantsGene:Bra035896 | EnsemblPlants:Bra035896.1 | EnsemblPlants:Bra035896.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M4F496 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF3 | SUPFAM:SSF101941 |
| UniParc:UPI0002542097 | SEG:seg | : | : | : | : |
Description
AT5G62380 (E=4e-163) VND6, ANAC101 | ANAC101 (ARABIDOPSIS NAC-DOMAIN PROTEIN 101); transcription activator/ transcription factor/ transcription regulator
Coordinates
chrA09:+:3024606..3025769
Molecular Weight (calculated)
38522.3 Da
IEP (calculated)
4.950
GRAVY (calculated)
-1.020
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLSHIPPG YRFHPTDEEL VDYYLKNKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT GEEREWYFFS YKDKKYPTGT RTNRATGSGF WKTTGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEEWVV CRAFKKKLTT INNNNPRTMM GSSSGQDSNW FRQQMDVANG NYYHFPDLES
201: PIMFQGSSSS LHDNDNNHYG VVLSNIHEAP SALMQRDDEG DHGHIITNDD DHMIMMNTNT NHHHQPELPN DDHNDQLMDW QTLDKLVASQ LILSQEEEEV
301: NQDPPSNNVS NETYNHLSEE KPSFSWAQNT HT
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEEWVV CRAFKKKLTT INNNNPRTMM GSSSGQDSNW FRQQMDVANG NYYHFPDLES
201: PIMFQGSSSS LHDNDNNHYG VVLSNIHEAP SALMQRDDEG DHGHIITNDD DHMIMMNTNT NHHHQPELPN DDHNDQLMDW QTLDKLVASQ LILSQEEEEV
301: NQDPPSNNVS NETYNHLSEE KPSFSWAQNT HT
001: MESLAHIPPG YRFHPTDEEL VDYYLKNKVA FPGMQVDVIK DVDLYKIEPW DIQELCGRGT GEEREWYFFS HKDKKYPTGT RTNRATGSGF WKATGRDKAI
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
101: YSKQELVGMR KTLVFYKGRA PNGQKSDWIM HEYRLETDEN GPPHEEGWVV CRAFKKKLTT MNYNNPRTMM GSSSGQESNW FTQQMDVGNG NYYHLPDLES
201: PRMFQGSSSS SLSSLHQNDQ DPYGVVLSTI NATPTTIMQR DDGHVITNDD DHMIMMNTST GDHHQSGLLV NDDHNDQVMD WQTLDKFVAS QLIMSQEEEE
301: VNKDPSDNSS NETFHHLSEE QAATMVSMNA SSSSSPCSFY SWAQNTHT
Arabidopsis Description
NAC101NAC domain-containing protein 101 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.