Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G420000.1 | Wheat | cytosol, nucleus, plastid | 86.52 | 89.59 |
| TraesCS4A01G420100.1 | Wheat | nucleus | 87.75 | 87.32 |
| TraesCS7D01G062600.1 | Wheat | cytosol, nucleus, plastid | 84.31 | 87.09 |
| TraesCS4A01G421000.1 | Wheat | nucleus | 86.27 | 85.64 |
| TraesCS7A01G068200.1 | Wheat | cytosol, nucleus, plastid | 41.18 | 84.42 |
| TraesCS4A01G420900.1 | Wheat | cytosol, nucleus, plastid | 82.35 | 83.79 |
| TraesCS4A01G421200.1 | Wheat | nucleus | 82.6 | 83.21 |
| TraesCS7A01G068300.1 | Wheat | cytosol, nucleus, plastid | 80.64 | 82.66 |
| TraesCS4A01G419900.1 | Wheat | nucleus | 77.7 | 81.49 |
| TraesCS4A01G421100.1 | Wheat | nucleus | 79.17 | 80.95 |
| HORVU7Hr1G012730.2 | Barley | cytosol, nucleus | 50.49 | 80.78 |
| TraesCS7A01G068000.1 | Wheat | cytosol, nucleus, plastid | 76.72 | 76.16 |
| CDY72666 | Canola | nucleus | 29.9 | 74.85 |
| TraesCS4A01G421300.1 | Wheat | cytosol, nucleus, plastid | 74.26 | 73.01 |
| HORVU7Hr1G012760.6 | Barley | plastid | 78.19 | 69.65 |
| HORVU7Hr1G012780.1 | Barley | nucleus | 74.75 | 68.08 |
| Os06t0131700-01 | Rice | nucleus | 60.05 | 62.03 |
| CDY35029 | Canola | cytosol | 31.62 | 62.02 |
| Zm00001d036050_P001 | Maize | cytosol, nucleus, plastid | 55.64 | 61.85 |
| EER87784 | Sorghum | cytosol, nucleus, plastid | 59.56 | 56.78 |
| Solyc10g005010.2.1 | Tomato | nucleus | 39.22 | 55.75 |
| KRG97237 | Soybean | nucleus | 35.78 | 55.09 |
| PGSC0003DMT400029321 | Potato | nucleus | 42.16 | 54.95 |
| KRG97235 | Soybean | nucleus | 35.54 | 54.72 |
| CDY26917 | Canola | nucleus | 39.46 | 52.27 |
| Bra010183.1-P | Field mustard | nucleus | 39.46 | 52.27 |
| Bra007640.1-P | Field mustard | cytosol, nucleus, plastid | 38.97 | 49.38 |
| CDY11382 | Canola | cytosol, nucleus, plastid | 38.97 | 49.38 |
| CDX73267 | Canola | cytosol | 39.22 | 49.23 |
| AT2G46770.1 | Thale cress | nucleus | 43.63 | 48.77 |
| AT3G61910.1 | Thale cress | nucleus | 39.71 | 48.5 |
| CDX76597 | Canola | cytosol, nucleus, peroxisome | 39.46 | 48.49 |
| CDY41554 | Canola | nucleus | 42.4 | 48.46 |
| VIT_15s0048g02660.t01 | Wine grape | nucleus | 45.83 | 48.45 |
| CDX80045 | Canola | nucleus | 42.4 | 48.19 |
| CDY25087 | Canola | cytosol, nucleus, peroxisome | 38.48 | 48.16 |
| PGSC0003DMT400014872 | Potato | nucleus | 40.93 | 47.99 |
| Bra004509.1-P | Field mustard | nucleus | 42.16 | 47.91 |
| Solyc08g008660.2.1 | Tomato | nucleus | 40.69 | 47.56 |
| CDX67870 | Canola | nucleus | 38.97 | 47.32 |
| Bra003478.1-P | Field mustard | nucleus | 38.97 | 47.32 |
| Bra040486.1-P | Field mustard | nucleus | 41.91 | 46.98 |
| PGSC0003DMT400031571 | Potato | nucleus | 42.4 | 46.76 |
| Bra023288.1-P | Field mustard | nucleus | 41.67 | 46.7 |
| CDX93819 | Canola | nucleus | 41.67 | 46.7 |
| CDY27524 | Canola | nucleus | 41.67 | 46.7 |
| AT1G32770.1 | Thale cress | nucleus | 40.93 | 46.65 |
| CDY01243 | Canola | nucleus | 42.16 | 46.36 |
| TraesCS7A01G317100.1 | Wheat | nucleus | 46.32 | 46.1 |
| TraesCS2A01G565900.1 | Wheat | cytosol, nucleus, plastid | 22.79 | 46.04 |
| Zm00001d045463_P001 | Maize | nucleus | 57.35 | 45.35 |
| VIT_02s0025g02710.t01 | Wine grape | nucleus | 44.61 | 44.94 |
| KRH47818 | Soybean | nucleus | 43.38 | 44.25 |
| KRH06383 | Soybean | nucleus | 45.34 | 41.76 |
| TraesCS2A01G566400.1 | Wheat | nucleus | 28.43 | 41.43 |
| TraesCS2A01G386300.1 | Wheat | cytosol, nucleus, peroxisome | 34.07 | 41.0 |
| TraesCS7A01G349500.1 | Wheat | nucleus | 36.76 | 40.76 |
| TraesCS2A01G311500.1 | Wheat | nucleus | 33.33 | 40.48 |
| TraesCS7A01G008800.1 | Wheat | nucleus | 33.09 | 40.18 |
| TraesCS4A01G486200.1 | Wheat | nucleus | 33.09 | 40.18 |
| TraesCS6A01G237900.1 | Wheat | nucleus | 33.58 | 38.92 |
| TraesCS2A01G566000.1 | Wheat | nucleus | 27.94 | 38.26 |
| TraesCS5A01G491700.1 | Wheat | cytosol, mitochondrion, nucleus | 33.58 | 37.33 |
| TraesCS2A01G566200.1 | Wheat | nucleus | 27.7 | 37.05 |
| TraesCS2A01G566100.1 | Wheat | nucleus | 28.68 | 36.68 |
| TraesCS7A01G326000.1 | Wheat | nucleus | 27.7 | 36.22 |
| TraesCS2A01G566300.1 | Wheat | nucleus | 28.19 | 35.49 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF39 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS4A01G420200 | EnsemblPlants:TraesCS4A01G420200.1 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:690936084..690938246
Molecular Weight (calculated)
43776.1 Da
IEP (calculated)
7.118
GRAVY (calculated)
-0.427
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDVDLNK LEPWDIQERC RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR
101: DKGIYSAAGS GRIGMRKTLV FYKGRAPHGH KSDWIMHEYR LDDAVAAATS PVFAAGDASS YYSGISSPVR GVAGDQSPPA QEDGWVICRV FRKKNIVVQH
201: QNGGGAASNK LVGAGAMEYS QSNCSSAVTA ASDKAKAHMH QQQHLPHSDD ALDHILSYMG RSSTASCKQE TKPTNPSSSA LDHLINGACH SGSSTLQYDK
301: FMKLPPLEHV VPGGLLPPPA EYGRDWDDLD RLAAYELNGL SHPASANTTN SMSYIADELG GTTSYSGGGT LHASSVTGAG DGDLWSLARS VSSLHADLAI
401: TCFNAVGC
101: DKGIYSAAGS GRIGMRKTLV FYKGRAPHGH KSDWIMHEYR LDDAVAAATS PVFAAGDASS YYSGISSPVR GVAGDQSPPA QEDGWVICRV FRKKNIVVQH
201: QNGGGAASNK LVGAGAMEYS QSNCSSAVTA ASDKAKAHMH QQQHLPHSDD ALDHILSYMG RSSTASCKQE TKPTNPSSSA LDHLINGACH SGSSTLQYDK
301: FMKLPPLEHV VPGGLLPPPA EYGRDWDDLD RLAAYELNGL SHPASANTTN SMSYIADELG GTTSYSGGGT LHASSVTGAG DGDLWSLARS VSSLHADLAI
401: TCFNAVGC
001: MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
101: KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE
201: EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL
301: NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL DPLLHLSV
Arabidopsis Description
NAC012NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.