CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0532000-01	Rice	cytosol	67.27	65.69
OQU93335	Sorghum	cytosol, mitochondrion, nucleus	65.47	58.76
VIT_04s0023g03110.t01	Wine grape	nucleus	56.46	56.12
AT5G66300.1	Thale cress	nucleus	48.65	55.48
Bra012065.1-P	Field mustard	nucleus	48.05	54.79
GSMUA_Achr8P12100_001	Banana	nucleus	54.35	54.52
CDY45221	Canola	nucleus	48.05	54.42
CDY30778	Canola	nucleus	48.05	54.24
GSMUA_Achr11P...	Banana	nucleus	53.45	53.29
KRH69806	Soybean	nucleus	55.56	51.1
Solyc02g084350.2.1	Tomato	nucleus	52.85	50.43
PGSC0003DMT400009136	Potato	nucleus	52.25	50.14
KRH08100	Soybean	nucleus	54.35	50.0
KXG31125	Sorghum	nucleus	45.95	44.09
OQU82026	Sorghum	nucleus	44.44	43.53
OQU75680	Sorghum	nucleus	43.24	42.48
EES14359	Sorghum	nucleus	41.14	40.9
EES13158	Sorghum	nucleus	40.24	40.24
KXG20105	Sorghum	cytosol, nucleus, plastid	38.44	36.06
EES04857	Sorghum	nucleus	36.94	35.76
EES12234	Sorghum	nucleus	35.74	34.59
KXG24274	Sorghum	nucleus	41.74	33.17
EER87784	Sorghum	cytosol, nucleus, plastid	38.74	30.14
OQU76499	Sorghum	nucleus	25.83	30.07

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8062617	UniProt:C5WUG9	EnsemblPlants:EER94595	ProteinID:EER94595
ProteinID:EER94595.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	ProteinID:OQU92254.1	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF107	EnsemblPlantsGene:SORBI_3001G316800	SUPFAM:SSF101941	UniParc:UPI0001A830A1	RefSeq:XP_002467597.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:60505053..60512997

Molecular Weight (calculated)

36667.9 Da

IEP (calculated)

6.237

GRAVY (calculated)

-0.572

Length

333 amino acids

Sequence
(BLAST)

001: MESCVPPGFR FHPTDEELVG YYLRKKVASQ KIDLDVIRDV DLYRIEPWDL QEHCKIGYEE QSDWYFFSYK DRKYPTGTRT NRATLTGFWK ATGRDKAVRD
101: TKHGGGGLIG MRKTLVFYTG RAPNGRKTDW IMHEYRLETD ENAAPQEEGW VVCRAFKKRT MHPPRSSVAG AWDRSYSYYH DPIVASAAAR FKQESPAEPD
201: GAAAAAAASA ALLQYSSRLA ELPQLESPPL MAPHQGSHLM ALVDGEGDSA ATTDWRALDR FVASQLSPDE ERSAGQGPGL HPEYCGGKPP LGTHAAGNNE
301: DASDMAALLL LDGVRHGEAG LLGSVADPAC LHT

Best Arabidopsis Sequence Match ( AT4G36160.2 )
(BLAST)

001: MKKIMESVDQ SCSVPPGFRF HPTDEELVGY YLRKKVASQK IDLDVIRDID LYRIEPWDLQ ESCRIGYEER NEWYFFSHKD KKYPTGTRTN RATMAGFWKA
101: TGRDKAVYDK SKLIGMRKTL VFYKGRAPNG QKTDWIMHEY RLESDENAPP QEEGWVVCRA FKKKPMTGQA KNTETWSSSY FYDELPSGVR SVTEPLNYVS
201: KQKQNVFAQD LMFKQELEGS DIGLNFIHCD QFIQLPQLES PSLPLTKRPV SLTSITSLEK NKNIYKRHLI EEDVSFNALI SSGNKDKKKK KTSVMTTDWR
301: ALDKFVASQL MSQEDGVSGF GGHHEEDNNK IGHYNNEESN NKGSVETASS TLLSDREEEN RFISGLLCSN LDYDLYRDLH V

Arabidopsis Description

ANAC076NAC domain containing protein 76 [Source:TAIR;Acc:AT4G36160]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.