Factsheet for AT3G16050.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20176	Canola	cytosol	83.12	85.86
Bra021157.1-P	Field mustard	cytosol	81.85	84.54
Solyc03g120090.1.1	Tomato	cytosol	66.56	68.52
PGSC0003DMT400014295	Potato	cytosol	65.29	67.21
VIT_09s0002g04490.t01	Wine grape	cytosol	61.47	65.87
CDY50623	Canola	plastid	82.8	64.52
AT5G01410.1	Thale cress	cytosol	60.19	61.16
AT2G38230.1	Thale cress	cytosol	57.96	58.9
AT2G38210.1	Thale cress	cytosol, peroxisome, plastid	11.15	44.3

Protein Annotations

KEGG:00750+4.3.3.6	Gene3D:3.20.20.70	MapMan:7.7.1.1	EntrezGene:820850	Symbol:A37	ProteinID:AAD01898.1
ProteinID:AEE75766.1	EMBL:AF029980	EMBL:AK228092	ArrayExpress:AT3G16050	EnsemblPlantsGene:AT3G16050	RefSeq:AT3G16050
TAIR:AT3G16050	RefSeq:AT3G16050-TAIR-G	EnsemblPlants:AT3G16050.1	TAIR:AT3G16050.1	InterPro:Aldolase_TIM	Unigene:At.7601
ProteinID:BAB02670.1	EMBL:BT003136	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0042819	GO:GO:0042823	GO:GO:0046982
InterPro:IPR001852	InterPro:IPR013785	RefSeq:NP_188226.1	PFAM:PF01680	PIRSF:PIRSF029271	PO:PO:0000013
PO:PO:0000025	PO:PO:0000036	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007017	PO:PO:0007064
PO:PO:0007103	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0009062
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS01235
PFscan:PS51129	PANTHER:PTHR31829	PANTHER:PTHR31829:SF2	InterPro:PdxS/SNZ	InterPro:PdxS/SNZ_N	UniProt:Q9ZNR6
InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	UniParc:UPI000000BF06	:	:	:

Description

PDX12Pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNR6]

Coordinates

chr3:-:5443950..5445329

Molecular Weight (calculated)

33837.5 Da

IEP (calculated)

5.416

GRAVY (calculated)

-0.073

Length

314 amino acids

Sequence
(BLAST)

001: MADQAMTDQD QGAVTLYSGT AITDAKKNHP FSVKVGLAQV LRGGAIVEVS SVNQAKLAES AGACSVIVSD PVRSRGGVRR MPDPVLIKEV KRAVSVPVMA
101: RARVGHFVEA QILESLAVDY IDESEIISVA DDDHFINKHN FRSPFICGCR DTGEALRRIR EGAAMIRIQG DLTATGNIAE TVKNVRSLMG EVRVLNNMDD
201: DEVFTFAKKI SAPYDLVAQT KQMGRVPVVQ FASGGITTPA DAALMMQLGC DGVFVGSEVF DGPDPFKKLR SIVQAVQHYN DPHVLAEMSS GLENAMESLN
301: VRGDRIQDFG QGSV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.