Factsheet for AT3G62290.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 3
peroxisome 1
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum, golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37791	Canola	cytosol	100.0	100.0
AT2G47170.2	Thale cress	mitochondrion	98.89	98.89
AT1G10630.2	Thale cress	mitochondrion	98.34	98.34
AT1G23490.1	Thale cress	mitochondrion, peroxisome	98.34	98.34
AT1G70490.4	Thale cress	mitochondrion, peroxisome	98.34	98.34
GSMUA_Achr5P07760_001	Banana	mitochondrion	97.79	97.79
AT5G14670.1	Thale cress	mitochondrion	97.24	93.62
AT2G24765.1	Thale cress	cytosol	60.22	59.89
AT2G15310.1	Thale cress	mitochondrion	66.85	59.02
AT3G03120.1	Thale cress	cytosol	58.56	55.21
AT5G17060.2	Thale cress	cytosol	58.01	54.69
AT3G22950.1	Thale cress	cytosol	53.59	53.01
AT2G18390.1	Thale cress	cytosol	48.07	47.03
AT5G52210.2	Thale cress	cytosol	34.81	30.73

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EntrezGene:825402	UniProt:A0A178VN00	ProteinID:AEE80332.1	ProteinID:AEE80333.1
ProteinID:AEE80334.1	EMBL:AF372902	Symbol:ARFA1E	ArrayExpress:AT3G62290	EnsemblPlantsGene:AT3G62290	RefSeq:AT3G62290
TAIR:AT3G62290	RefSeq:AT3G62290-TAIR-G	EnsemblPlants:AT3G62290.1	TAIR:AT3G62290.1	Symbol:ATARFA1E	EMBL:AY057728
EMBL:AY085382	ProteinID:CAB71889.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005794
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987
GO:GO:0016004	GO:GO:0030234	GO:GO:0043085	InterPro:IPR024156	RefSeq:NP_001190161.1	RefSeq:NP_001190162.1
RefSeq:NP_191788.1	ProteinID:OAP06182.1	InterPro:P-loop_NTPase	PFAM:PF00025	PO:PO:0000005	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	UniProt:Q9M1P5	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00000A4A38	:

Description

ARFA1EADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5]

Coordinates

chr3:+:23051631..23053893

Molecular Weight (calculated)

20608.8 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.217

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFGKLFS KLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.