Factsheet for AT2G47170.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G10630.2	Thale cress	mitochondrion	99.45	99.45
AT1G23490.1	Thale cress	mitochondrion, peroxisome	98.89	98.89
AT1G70490.4	Thale cress	mitochondrion, peroxisome	98.89	98.89
TraesCS2A01G235500.1	Wheat	golgi, plastid	98.89	98.89
PGSC0003DMT400003226	Potato	mitochondrion	98.89	98.89
AT3G62290.1	Thale cress	cytosol	98.89	98.89
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	98.34	98.34
Os07t0223400-01	Rice	mitochondrion	98.34	98.34
Os07t0223100-01	Rice	plasma membrane	98.34	98.34
EER96075	Sorghum	mitochondrion	98.34	98.34
GSMUA_Achr2P11590_001	Banana	mitochondrion	98.34	98.34
Os03t0811900-01	Rice	plasma membrane	97.79	97.79
VIT_14s0066g01080.t01	Wine grape	mitochondrion	97.24	97.24
EER93218	Sorghum	mitochondrion	97.24	97.24
Zm00001d023657_P001	Maize	cytosol	24.86	95.74
GSMUA_Achr7P18350_001	Banana	cytosol	87.29	95.18
Zm00001d005231_P006	Maize	cytosol	97.79	95.16
GSMUA_Achr10P...	Banana	cytosol	86.74	94.58
AT5G14670.1	Thale cress	mitochondrion	97.79	94.15
KRH36902	Soybean	endoplasmic reticulum	95.58	94.02
Zm00001d019191_P007	Maize	peroxisome	98.34	89.45
GSMUA_Achr11P...	Banana	cytosol	98.34	89.0
Zm00001d013007_P001	Maize	plastid	96.69	86.21
TraesCS5A01G467400.1	Wheat	cytosol	97.24	83.41
TraesCS5D01G480200.1	Wheat	unclear	97.24	83.41
TraesCS5B01G479100.1	Wheat	golgi	96.69	82.94
HORVU5Hr1G111500.2	Barley	mitochondrion	96.69	74.79
GSMUA_Achr3P18390_001	Banana	plasma membrane	97.79	73.14
Zm00001d012537_P003	Maize	cytosol	77.35	68.97
AT2G24765.1	Thale cress	cytosol	60.77	60.44
AT2G15310.1	Thale cress	mitochondrion	66.85	59.02
GSMUA_Achr6P08570_001	Banana	cytosol	98.34	55.45
AT3G03120.1	Thale cress	cytosol	58.56	55.21
AT5G17060.2	Thale cress	cytosol	58.01	54.69
AT3G22950.1	Thale cress	cytosol	53.59	53.01
AT2G18390.1	Thale cress	cytosol	48.07	47.03
AT5G52210.2	Thale cress	cytosol	34.81	30.73

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	PDB:3AQ4	EntrezGene:819330	UniProt:A0A178VXE5	ProteinID:AAB63817.1
ProteinID:AAM15469.1	ProteinID:AEC10810.1	ProteinID:ANM62132.1	ProteinID:ANM62133.1	Symbol:ARF1A1C	ArrayExpress:AT2G47170
EnsemblPlantsGene:AT2G47170	RefSeq:AT2G47170	TAIR:AT2G47170	RefSeq:AT2G47170-TAIR-G	EnsemblPlants:AT2G47170.2	EMBL:AY074859
EMBL:AY087342	EMBL:AY142032	Unigene:At.23262	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005769	GO:GO:0005794	GO:GO:0005802	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015031
GO:GO:0016004	GO:GO:0016192	GO:GO:0030234	GO:GO:0031001	GO:GO:0043085	GO:GO:0090354
GO:GO:0098876	InterPro:IPR024156	EMBL:M95166	RefSeq:NP_001324310.1	RefSeq:NP_001324311.1	RefSeq:NP_182239.1
ProteinID:OAP09713.1	InterPro:P-loop_NTPase	UniProt:P36397	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0000000FF0	:

Description

ARF1ADP-ribosylation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P36397]

Coordinates

chr2:+:19366615..19368518

Molecular Weight (calculated)

20609.8 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.206

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.