Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 5
- peroxisome 1
- endoplasmic reticulum 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G70490.4 | Thale cress | mitochondrion, peroxisome | 99.45 | 99.45 |
| AT1G23490.1 | Thale cress | mitochondrion, peroxisome | 99.45 | 99.45 |
| AT2G47170.2 | Thale cress | mitochondrion | 99.45 | 99.45 |
| PGSC0003DMT400003226 | Potato | mitochondrion | 98.89 | 98.89 |
| TraesCS2A01G235500.1 | Wheat | golgi, plastid | 98.34 | 98.34 |
| AT3G62290.1 | Thale cress | cytosol | 98.34 | 98.34 |
| GSMUA_Achr2P11590_001 | Banana | mitochondrion | 98.34 | 98.34 |
| TraesCS2D01G244900.1 | Wheat | mitochondrion, peroxisome | 97.79 | 97.79 |
| Os07t0223400-01 | Rice | mitochondrion | 97.79 | 97.79 |
| Os07t0223100-01 | Rice | plasma membrane | 97.79 | 97.79 |
| Os03t0811900-01 | Rice | plasma membrane | 97.79 | 97.79 |
| EER96075 | Sorghum | mitochondrion | 97.79 | 97.79 |
| VIT_14s0066g01080.t01 | Wine grape | mitochondrion | 97.24 | 97.24 |
| EER93218 | Sorghum | mitochondrion | 97.24 | 97.24 |
| Zm00001d023657_P001 | Maize | cytosol | 24.86 | 95.74 |
| GSMUA_Achr7P18350_001 | Banana | cytosol | 87.29 | 95.18 |
| Zm00001d005231_P006 | Maize | cytosol | 97.24 | 94.62 |
| GSMUA_Achr10P... | Banana | cytosol | 86.74 | 94.58 |
| AT5G14670.1 | Thale cress | mitochondrion | 97.79 | 94.15 |
| KRH36902 | Soybean | endoplasmic reticulum | 95.03 | 93.48 |
| Zm00001d019191_P007 | Maize | peroxisome | 97.79 | 88.94 |
| GSMUA_Achr11P... | Banana | cytosol | 97.79 | 88.5 |
| Zm00001d013007_P001 | Maize | plastid | 96.69 | 86.21 |
| TraesCS5A01G467400.1 | Wheat | cytosol | 97.24 | 83.41 |
| TraesCS5D01G480200.1 | Wheat | unclear | 97.24 | 83.41 |
| TraesCS5B01G479100.1 | Wheat | golgi | 96.69 | 82.94 |
| HORVU5Hr1G111500.2 | Barley | mitochondrion | 96.69 | 74.79 |
| GSMUA_Achr3P18390_001 | Banana | plasma membrane | 98.34 | 73.55 |
| Zm00001d012537_P003 | Maize | cytosol | 76.8 | 68.47 |
| AT2G24765.1 | Thale cress | cytosol | 60.77 | 60.44 |
| AT2G15310.1 | Thale cress | mitochondrion | 66.85 | 59.02 |
| GSMUA_Achr6P08570_001 | Banana | cytosol | 98.89 | 55.76 |
| AT3G03120.1 | Thale cress | cytosol | 58.56 | 55.21 |
| AT5G17060.2 | Thale cress | cytosol | 58.01 | 54.69 |
| AT3G22950.1 | Thale cress | cytosol | 53.59 | 53.01 |
| AT2G18390.1 | Thale cress | cytosol | 48.07 | 47.03 |
| AT5G52210.2 | Thale cress | cytosol | 34.81 | 30.73 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | EntrezGene:837606 | UniProt:A0A178W4P5 | ProteinID:AEE28611.1 | EMBL:AK226308 |
| ProteinID:ANM59177.1 | ArrayExpress:AT1G10630 | EnsemblPlantsGene:AT1G10630 | RefSeq:AT1G10630 | TAIR:AT1G10630 | RefSeq:AT1G10630-TAIR-G |
| EnsemblPlants:AT1G10630.2 | Symbol:ATARFA1F | EMBL:BT014776 | EMBL:BT015004 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016004 |
| GO:GO:0016020 | GO:GO:0030234 | GO:GO:0043085 | InterPro:IPR024156 | RefSeq:NP_001321560.1 | RefSeq:NP_172533.2 |
| ProteinID:OAP13228.1 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF182 | UniProt:Q6ID97 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI0000196C17 | : |
Description
ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
Coordinates
chr1:-:3512761..3514777
Molecular Weight (calculated)
20623.8 Da
IEP (calculated)
6.960
GRAVY (calculated)
-0.193
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.