Factsheet for HORVU5Hr1G111500.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0811900-01	Rice	plasma membrane	76.5	98.89
GSMUA_Achr2P11590_001	Banana	mitochondrion	76.07	98.34
Zm00001d023657_P001	Maize	cytosol	19.66	97.87
Os07t0223400-01	Rice	mitochondrion	75.64	97.79
Os07t0223100-01	Rice	plasma membrane	75.64	97.79
TraesCS2A01G235500.1	Wheat	golgi, plastid	75.21	97.24
KRH56584	Soybean	mitochondrion	75.21	97.24
KRG93262	Soybean	nucleus	75.21	97.24
AT1G23490.1	Thale cress	mitochondrion, peroxisome	74.79	96.69
VIT_14s0066g01080.t01	Wine grape	mitochondrion	74.79	96.69
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	74.79	96.69
PGSC0003DMT400003226	Potato	mitochondrion	74.79	96.69
CDY54291	Canola	mitochondrion, peroxisome	74.79	96.69
CDY44152	Canola	mitochondrion, peroxisome	74.79	96.69
CDY41444	Canola	mitochondrion	74.79	96.69
CDY25787	Canola	mitochondrion, peroxisome	74.79	96.69
CDY11588	Canola	mitochondrion, peroxisome	74.79	96.69
CDY09441	Canola	mitochondrion, peroxisome	74.79	96.69
CDY04706	Canola	mitochondrion, peroxisome	74.79	96.69
CDY03747	Canola	mitochondrion, peroxisome	74.79	96.69
CDX91717	Canola	mitochondrion	74.79	96.69
Bra016344.1-P	Field mustard	mitochondrion	74.79	96.69
AT2G47170.2	Thale cress	mitochondrion	74.79	96.69
AT1G10630.2	Thale cress	mitochondrion	74.79	96.69
AT1G70490.4	Thale cress	mitochondrion, peroxisome	74.79	96.69
CDY47137	Canola	peroxisome	74.36	96.13
Bra024604.1-P	Field mustard	mitochondrion	74.36	96.13
Zm00001d005231_P006	Maize	cytosol	76.07	95.7
GSMUA_Achr7P18350_001	Banana	cytosol	67.52	95.18
Bra016215.1-P	Field mustard	cytosol	73.5	95.03
GSMUA_Achr10P...	Banana	cytosol	66.67	93.98
AT5G14670.1	Thale cress	mitochondrion	75.21	93.62
Bra012376.1-P	Field mustard	cytosol	74.79	93.09
KRH36902	Soybean	endoplasmic reticulum	71.79	91.3
CDX68343	Canola	cytosol	69.66	89.56
Bra003954.1-P	Field mustard	cytosol	69.23	89.5
Zm00001d019191_P007	Maize	peroxisome	75.64	88.94
CDX75849	Canola	cytosol	43.59	88.7
Zm00001d013007_P001	Maize	plastid	76.5	88.18
GSMUA_Achr11P...	Banana	cytosol	74.79	87.5
TraesCS5B01G479100.1	Wheat	golgi	76.92	85.31
TraesCS5D01G480200.1	Wheat	unclear	76.5	84.83
TraesCS5A01G467400.1	Wheat	cytosol	76.5	84.83
CDY23500	Canola	cytosol	70.09	76.64
HORVU1Hr1G068790.1	Barley	plastid	75.64	75.0
GSMUA_Achr3P18390_001	Banana	plasma membrane	74.79	72.31
HORVU0Hr1G027130.1	Barley	plasma membrane	75.64	69.69
Zm00001d012537_P003	Maize	cytosol	58.55	67.49
HORVU5Hr1G045440.2	Barley	cytosol, plastid	71.79	66.67
HORVU2Hr1G054780.5	Barley	cytosol	47.01	64.33
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	46.58	59.89
OQU86657	Sorghum	peroxisome, plastid	76.5	58.31
HORVU1Hr1G051350.1	Barley	cytosol	46.58	57.07
HORVU3Hr1G079700.1	Barley	cytosol	75.64	56.91
GSMUA_Achr6P08570_001	Banana	cytosol	76.5	55.76
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.17	51.09
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	42.31	49.01
HORVU6Hr1G067840.2	Barley	cytosol	45.73	38.35
HORVU5Hr1G004340.2	Barley	cytosol, plastid	37.18	36.55
HORVU5Hr1G002120.6	Barley	cytosol, plastid	37.18	34.25
HORVU1Hr1G014610.1	Barley	cytosol	27.78	32.02

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A287SQV8	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	EnsemblPlantsGene:HORVU5Hr1G111500	EnsemblPlants:HORVU5Hr1G111500.2
InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF215	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	TMHMM:TMhelix	UniParc:UPI000B470594	:

Description

No Description!

Coordinates

chrchr5H:-:636418916..636421063

Molecular Weight (calculated)

26822.6 Da

IEP (calculated)

6.513

GRAVY (calculated)

0.020

Length

234 amino acids

Sequence
(BLAST)

001: MGLTFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TTGEGLYEGL DWLSSNIANK ILKELGALWM DDSITGYLGI
201: VLGWDGAMLF PYVLCIFLRS TVTELRLWFH CHTI

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.