Factsheet for HORVU1Hr1G051350.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
endoplasmic reticulum 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G201300.1	Wheat	cytosol	100.0	100.0
TraesCS1B01G212500.1	Wheat	cytosol	100.0	100.0
TraesCS1A01G197800.1	Wheat	golgi	100.0	100.0
Os10t0580200-01	Rice	plasma membrane	97.38	96.88
Zm00001d030157_P001	Maize	extracellular	96.86	95.36
EER94416	Sorghum	cytosol	96.34	94.85
GSMUA_Achr5P03700_001	Banana	cytosol	88.48	87.11
GSMUA_Achr4P27450_001	Banana	cytosol	87.43	86.08
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	72.25	68.32
HORVU6Hr1G067840.2	Barley	cytosol	88.48	60.57
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	50.79	53.3
HORVU5Hr1G111500.2	Barley	mitochondrion	57.07	46.58
HORVU1Hr1G068790.1	Barley	plastid	56.54	45.76
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.98	45.65
HORVU5Hr1G045440.2	Barley	cytosol, plastid	57.59	43.65
HORVU0Hr1G027130.1	Barley	plasma membrane	56.54	42.52
HORVU2Hr1G054780.5	Barley	cytosol	37.17	41.52
HORVU3Hr1G079700.1	Barley	cytosol	56.54	34.73
HORVU5Hr1G004340.2	Barley	cytosol, plastid	40.84	32.77
HORVU5Hr1G002120.6	Barley	cytosol, plastid	40.84	30.71
HORVU1Hr1G014610.1	Barley	cytosol	32.46	30.54

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G051350	EnsemblPlants:HORVU1Hr1G051350.1	InterPro:IPR024156	UniProt:M0XV06
InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF300
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI00019235B0	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:380766212..380768879

Molecular Weight (calculated)

21546.1 Da

IEP (calculated)

6.787

GRAVY (calculated)

-0.034

Length

191 amino acids

Sequence
(BLAST)

001: MGQAFRKLFD AFFGNKEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VVFTVWDVGG QEKLRPLWRH YFNNTDALIY VVDSLDRDRI
101: GRARAEFQAI INDPFMLNSV LLVFANKQDM RGAMTPMEVC EGLGLYDLNN RIWHIQGTCA LKGDGLYEGL DWLATTLDEM RATGRLASTS A

Best Arabidopsis Sequence Match ( AT5G17060.2 )
(BLAST)

001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF

Arabidopsis Description

ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.