Factsheet for HORVU7Hr1G061220.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G059110.2
HORVU2Hr1G059170.7

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24765.1	HORVU2Hr1G059110.2	AT5G66030.1	16236155
AT2G24765.1	HORVU2Hr1G059170.7	AT5G66030.1	16236155
AT2G24765.1	HORVU2Hr1G059110.2	AT5G66030.1	16830178
AT2G24765.1	HORVU2Hr1G059170.7	AT5G66030.1	16830178

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0248900-01	Rice	nucleus, plasma membrane	98.35	98.35
EES14799	Sorghum	cytosol, mitochondrion	98.35	98.35
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	92.86	92.86
Solyc07g006640.2.1	Tomato	plastid	92.31	92.31
KRH02913	Soybean	cytosol	84.07	92.17
KRH18982	Soybean	endoplasmic reticulum	86.81	91.86
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	91.76	91.76
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	99.45	91.41
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	99.45	91.41
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	98.9	90.91
AT2G24765.1	Thale cress	cytosol	90.66	90.66
CDX76793	Canola	cytosol	90.11	90.11
Bra007833.1-P	Field mustard	cytosol	90.11	90.11
Bra032062.1-P	Field mustard	cytosol	90.11	90.11
CDY45596	Canola	cytosol	90.11	90.11
CDY34756	Canola	cytosol	90.11	90.11
VIT_04s0008g07360.t01	Wine grape	cytosol, mitochondrion	89.56	90.06
CDX68781	Canola	cytosol	89.56	89.56
Bra011295.1-P	Field mustard	cytosol	89.56	89.56
CDX75192	Canola	cytosol	89.56	89.56
CDY36172	Canola	cytosol	86.81	86.81
VIT_11s0052g01720.t01	Wine grape	cytosol, mitochondrion	89.01	72.97
PGSC0003DMT400070636	Potato	cytosol, mitochondrion	85.71	61.42
HORVU1Hr1G051350.1	Barley	cytosol	53.3	50.79
HORVU5Hr1G111500.2	Barley	mitochondrion	59.89	46.58
HORVU1Hr1G068790.1	Barley	plastid	59.89	46.19
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	50.55	45.54
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.05	44.57
HORVU0Hr1G027130.1	Barley	plasma membrane	59.89	42.91
HORVU5Hr1G045440.2	Barley	cytosol, plastid	59.34	42.86
HORVU2Hr1G054780.5	Barley	cytosol	38.46	40.94
HORVU6Hr1G067840.2	Barley	cytosol	53.85	35.13
HORVU3Hr1G079700.1	Barley	cytosol	59.89	35.05
HORVU5Hr1G004340.2	Barley	cytosol, plastid	41.76	31.93
HORVU1Hr1G014610.1	Barley	cytosol	35.16	31.53
HORVU5Hr1G002120.6	Barley	cytosol, plastid	41.76	29.92

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EMBL:AK357571	EMBL:AK365001	UniProt:F2D114	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005795	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0046686	EnsemblPlantsGene:HORVU7Hr1G061220
EnsemblPlants:HORVU7Hr1G061220.1	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF41	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00019235B2	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D114]

Coordinates

chrchr7H:+:285759629..285782957

Molecular Weight (calculated)

20342.3 Da

IEP (calculated)

5.284

GRAVY (calculated)

-0.037

Length

182 amino acids

Sequence
(BLAST)

001: MGIVFTRLFS SVFGNREARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAIIY VVDSSDTDRL
101: VTAKEEFHSI LEEDELKGAV VLVYANKQDL PGALDDAAIT ESLELHKIKS RQWAIFKTSA IKGEGLFEGL NWLSNALKSG SS

Best Arabidopsis Sequence Match ( AT2G24765.1 )
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Arabidopsis Description

ARF3ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P40940]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.