Factsheet for Bra007833.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 3
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34756	Canola	cytosol	100.0	100.0
Bra032062.1-P	Field mustard	cytosol	100.0	100.0
AT2G24765.1	Thale cress	cytosol	99.45	99.45
CDX76793	Canola	cytosol	99.45	99.45
Bra011295.1-P	Field mustard	cytosol	97.25	97.25
Solyc07g006640.2.1	Tomato	plastid	93.41	93.41
VIT_04s0008g07360.t01	Wine grape	cytosol, mitochondrion	92.86	93.37
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	92.86	92.86
KRH18982	Soybean	endoplasmic reticulum	87.36	92.44
KRH02913	Soybean	cytosol	84.07	92.17
EES14799	Sorghum	cytosol, mitochondrion	91.76	91.76
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	91.76	91.76
Os08t0248900-01	Rice	nucleus, plasma membrane	90.66	90.66
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	90.11	90.11
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	89.56	82.32
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	89.56	82.32
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	89.01	81.82
PGSC0003DMT400070636	Potato	cytosol, mitochondrion	85.71	61.42
Bra027153.1-P	Field mustard	cytosol	59.34	59.67
Bra024604.1-P	Field mustard	mitochondrion	59.34	59.67
Bra021387.1-P	Field mustard	cytosol	59.34	59.67
Bra016344.1-P	Field mustard	mitochondrion	59.34	59.67
Bra004475.1-P	Field mustard	cytosol	59.34	59.67
Bra014403.1-P	Field mustard	cytosol	58.79	59.12
Bra003954.1-P	Field mustard	cytosol	58.24	58.56
Bra016215.1-P	Field mustard	cytosol	58.24	58.56
Bra008746.1-P	Field mustard	mitochondrion	59.89	57.67
Bra012376.1-P	Field mustard	cytosol	59.34	57.45
Bra000443.1-P	Field mustard	cytosol	59.34	56.25
Bra032015.1-P	Field mustard	cytosol	56.59	53.65
Bra021371.1-P	Field mustard	cytosol	56.04	53.12
Bra008579.1-P	Field mustard	cytosol	54.4	51.56
Bra007917.1-P	Field mustard	cytosol	42.31	51.33
Bra039725.1-P	Field mustard	cytosol	49.45	49.18
Bra036878.1-P	Field mustard	cytosol	49.45	49.18
Bra039613.1-P	Field mustard	cytosol	42.86	42.16
Bra024470.1-P	Field mustard	cytosol	41.21	40.54
Bra028298.1-P	Field mustard	cytosol	34.07	30.85
Bra029132.1-P	Field mustard	cytosol	33.52	30.35
Bra036410.1-P	Field mustard	mitochondrion	51.65	22.38

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	ProteinID:AAB17725	ProteinID:AAB17725.1	EnsemblPlantsGene:Bra007833	EnsemblPlants:Bra007833.1
EnsemblPlants:Bra007833.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0016192
InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF41	UniProt:Q96361	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	EMBL:U38470	UniParc:UPI000016DCF1	SEG:seg

Description

ARF1ADP-ribosylation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96361]

Coordinates

chrA09:-:31152087..31153275

Molecular Weight (calculated)

20257.3 Da

IEP (calculated)

5.020

GRAVY (calculated)

0.013

Length

182 amino acids

Sequence
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEEELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Best Arabidopsis Sequence Match ( AT2G24765.1 )
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Arabidopsis Description

ARF3ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P40940]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.