CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 4
endoplasmic reticulum 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG36201

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24765.1	KXG36201	AT5G66030.1	16236155
AT2G24765.1	KXG36201	AT5G66030.1	16830178

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0248900-01	Rice	nucleus, plasma membrane	98.9	98.9
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	98.35	98.35
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	94.51	94.51
KRH02913	Soybean	cytosol	85.71	93.98
Solyc07g006640.2.1	Tomato	plastid	93.96	93.96
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	93.41	93.41
KRH18982	Soybean	endoplasmic reticulum	87.91	93.02
AT2G24765.1	Thale cress	cytosol	92.31	92.31
Bra007833.1-P	Field mustard	cytosol	91.76	91.76
CDY45596	Canola	cytosol	91.76	91.76
CDY34756	Canola	cytosol	91.76	91.76
CDX76793	Canola	cytosol	91.76	91.76
Bra032062.1-P	Field mustard	cytosol	91.76	91.76
CDX75192	Canola	cytosol	91.21	91.21
CDX68781	Canola	cytosol	91.21	91.21
Bra011295.1-P	Field mustard	cytosol	91.21	91.21
VIT_04s0008g07360.t01	Wine grape	cytosol, mitochondrion	90.66	91.16
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	97.8	89.9
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	97.8	89.9
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	97.25	89.39
CDY36172	Canola	cytosol	88.46	88.46
VIT_11s0052g01720.t01	Wine grape	cytosol, mitochondrion	89.56	73.42
PGSC0003DMT400070636	Potato	cytosol, mitochondrion	86.81	62.2
EER93218	Sorghum	mitochondrion	61.54	61.88
EES19719	Sorghum	mitochondrion	60.44	60.77
EER96075	Sorghum	mitochondrion	60.44	60.77
EES07411	Sorghum	cytosol	54.4	51.03
EER94416	Sorghum	cytosol	54.4	51.03
EES06219	Sorghum	mitochondrion	52.75	49.48
EER89435	Sorghum	cytosol	49.45	47.62
EES08754	Sorghum	cytosol, mitochondrion	47.8	47.28
OQU85607	Sorghum	cytosol, mitochondrion	45.05	45.81
KXG37868	Sorghum	cytosol	43.96	43.24
OQU87737	Sorghum	cytosol	60.44	41.51
OQU86657	Sorghum	peroxisome, plastid	60.44	35.83
EER94751	Sorghum	cytosol	35.71	32.18
EER99714	Sorghum	cytosol	34.62	31.03

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EntrezGene:8067937	UniProt:C5YJL5	EnsemblPlants:EES14799	ProteinID:EES14799
ProteinID:EES14799.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005795	GO:GO:0005886
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0046686	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF41	SMART:SM00177	SMART:SM00178	EnsemblPlantsGene:SORBI_3007G092100	SUPFAM:SSF52540
unigene:Sbi.5900	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00017B6BD5
RefSeq:XP_002445304.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:15563546..15569734

Molecular Weight (calculated)

20357.3 Da

IEP (calculated)

5.012

GRAVY (calculated)

-0.037

Length

182 amino acids

Sequence
(BLAST)

001: MGIVFTRLFS SVFGNREARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAIIY VVDSSDTDRL
101: VTAKEEFHAI LEEDELKGAV VLVYANKQDL PGALDDAAIT ESLELHKIKS RQWAIFKTSA IKGEGLFEGL DWLSNTLKSG SS

Best Arabidopsis Sequence Match ( AT2G24765.1 )
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Arabidopsis Description

ARF3ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P40940]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.