CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 3
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007833.1-P	Field mustard	cytosol	100.0	100.0
CDY45596	Canola	cytosol	100.0	100.0
AT2G24765.1	Thale cress	cytosol	99.45	99.45
CDX76793	Canola	cytosol	99.45	99.45
CDX68781	Canola	cytosol	97.25	97.25
CDX75192	Canola	cytosol	97.25	97.25
CDY36172	Canola	cytosol	96.7	96.7
Solyc07g006640.2.1	Tomato	plastid	93.41	93.41
VIT_04s0008g07360.t01	Wine grape	cytosol, mitochondrion	92.86	93.37
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	92.86	92.86
KRH18982	Soybean	endoplasmic reticulum	87.36	92.44
KRH02913	Soybean	cytosol	84.07	92.17
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	91.76	91.76
EES14799	Sorghum	cytosol, mitochondrion	91.76	91.76
Os08t0248900-01	Rice	nucleus, plasma membrane	90.66	90.66
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	90.11	90.11
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	89.56	82.32
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	89.56	82.32
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	89.01	81.82
PGSC0003DMT400070636	Potato	cytosol, mitochondrion	85.71	61.42
CDY54291	Canola	mitochondrion, peroxisome	59.34	59.67
CDY27506	Canola	cytosol	59.34	59.67
CDY37791	Canola	cytosol	59.34	59.67
CDY53050	Canola	cytosol	59.34	59.67
CDY51415	Canola	cytosol	59.34	59.67
CDY47221	Canola	mitochondrion	59.34	59.67
CDY47137	Canola	peroxisome	59.34	59.67
CDY44152	Canola	mitochondrion, peroxisome	59.34	59.67
CDY41444	Canola	mitochondrion	59.34	59.67
CDY25787	Canola	mitochondrion, peroxisome	59.34	59.67
CDY11588	Canola	mitochondrion, peroxisome	59.34	59.67
CDY09441	Canola	mitochondrion, peroxisome	59.34	59.67
CDY04706	Canola	mitochondrion, peroxisome	59.34	59.67
CDY03747	Canola	mitochondrion, peroxisome	59.34	59.67
CDX93979	Canola	mitochondrion, peroxisome	59.34	59.67
CDX91717	Canola	mitochondrion	59.34	59.67
CDX89139	Canola	cytosol	59.34	59.67
CDX80083	Canola	cytosol	59.34	59.67
CDX68343	Canola	cytosol	58.24	58.24
CDX95712	Canola	cytosol	59.34	56.84
CDX83340	Canola	cytosol	59.34	56.54
CDX75849	Canola	cytosol	35.71	56.52
CDY28739	Canola	cytosol	56.59	53.65
CDY43149	Canola	cytosol	56.59	53.65
CDY23463	Canola	cytosol	56.04	53.12
CDX69567	Canola	mitochondrion	59.89	52.91
CDX69406	Canola	cytosol	54.95	52.08
CDY16963	Canola	cytosol	54.95	52.08
CDY09875	Canola	mitochondrion	59.89	51.17
CDY29751	Canola	cytosol	49.45	49.18
CDY53727	Canola	cytosol	49.45	49.18
CDY16265	Canola	cytosol	49.45	49.18
CDY36874	Canola	cytosol	48.9	48.63
CDY23500	Canola	cytosol	56.59	48.13
CDY48224	Canola	mitochondrion	51.65	45.85
CDX71216	Canola	mitochondrion	51.65	44.98
CDY29231	Canola	cytosol	42.86	42.16
CDY36479	Canola	cytosol	42.86	42.16
CDY13039	Canola	cytosol	42.86	31.84
CDY00519	Canola	cytosol	34.62	30.58
CDY38908	Canola	cytosol	34.07	30.24
CDY31913	Canola	cytosol	34.07	30.1
CDY32591	Canola	cytosol	34.07	24.51
CDY25962	Canola	mitochondrion	36.26	23.83

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:A0A078HAM9	UniProt:A0A078HAM9	EnsemblPlants:CDY34756	ProteinID:CDY34756
ProteinID:CDY34756.1	ProteinID:CDY45596.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00057295001	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF41	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000016DCF1
SEG:seg	:	:	:	:	:

Description

BnaA09g41230DBnaA04g14630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAM9]

Coordinates

chrLK032341:-:105615..107163

Molecular Weight (calculated)

20257.3 Da

IEP (calculated)

5.020

GRAVY (calculated)

0.013

Length

182 amino acids

Sequence
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEEELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Best Arabidopsis Sequence Match ( AT2G24765.1 )
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Arabidopsis Description

ARF3ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P40940]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.