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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:golgi, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75849 Canola cytosol 27.08 65.22
CDY47221 Canola mitochondrion 35.02 53.59
CDX68343 Canola cytosol 35.02 53.3
CDX93979 Canola mitochondrion, peroxisome 34.66 53.04
CDY25787 Canola mitochondrion, peroxisome 34.66 53.04
CDY41444 Canola mitochondrion 34.66 53.04
CDY11588 Canola mitochondrion, peroxisome 34.66 53.04
CDY09441 Canola mitochondrion, peroxisome 34.66 53.04
CDY04706 Canola mitochondrion, peroxisome 34.66 53.04
CDY03747 Canola mitochondrion, peroxisome 34.66 53.04
CDY44152 Canola mitochondrion, peroxisome 34.66 53.04
CDX91717 Canola mitochondrion 34.66 53.04
CDY53050 Canola cytosol 34.66 53.04
CDY54291 Canola mitochondrion, peroxisome 34.66 53.04
CDX89139 Canola cytosol 34.3 52.49
CDX80083 Canola cytosol 34.3 52.49
CDY47137 Canola peroxisome 34.3 52.49
CDY51415 Canola cytosol 34.3 52.49
CDY37791 Canola cytosol 34.3 52.49
CDY27506 Canola cytosol 34.3 52.49
CDX95712 Canola cytosol 34.3 50.0
CDX83340 Canola cytosol 33.94 49.21
CDX69567 Canola mitochondrion 34.66 46.6
CDY09875 Canola mitochondrion 34.66 45.07
CDY23500 Canola cytosol 34.66 44.86
CDX68781 Canola cytosol 24.19 36.81
CDX75192 Canola cytosol 24.19 36.81
CDX76793 Canola cytosol 23.83 36.26
CDY34756 Canola cytosol 23.83 36.26
CDY45596 Canola cytosol 23.83 36.26
CDY48224 Canola mitochondrion 26.71 36.1
CDX71216 Canola mitochondrion 26.71 35.41
CDY36172 Canola cytosol 22.38 34.07
CDY16963 Canola cytosol 23.47 33.85
CDX69406 Canola cytosol 23.47 33.85
CDY43149 Canola cytosol 23.1 33.33
CDY28739 Canola cytosol 23.1 33.33
CDY23463 Canola cytosol 23.1 33.33
CDY36874 Canola cytosol 20.94 31.69
CDY16265 Canola cytosol 20.94 31.69
CDY29751 Canola cytosol 20.94 31.69
CDY53727 Canola cytosol 20.94 31.69
CDY36479 Canola cytosol 17.33 25.95
CDY29231 Canola cytosol 17.33 25.95
CDY13039 Canola cytosol 17.33 19.59
CDY38908 Canola cytosol 14.08 19.02
CDY00519 Canola cytosol 13.72 18.45
CDY31913 Canola cytosol 13.72 18.45
CDY32591 Canola cytosol 14.08 15.41
Protein Annotations
Gene3D:3.30.70.330Gene3D:3.40.50.300MapMan:35.1GO:A0A078GLC3UniProt:A0A078GLC3EnsemblPlants:CDY25962
ProteinID:CDY25962ProteinID:CDY25962.1GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0007154
GO:GO:0007165GO:GO:0007264GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00033474001InterPro:IPR000504InterPro:IPR012677InterPro:IPR024156InterPro:Nucleotide-bd_a/b_plait_sfInterPro:P-loop_NTPase
PFAM:PF00025PFAM:PF00076PFscan:PS50102PFscan:PS51417PANTHER:PTHR11711PANTHER:PTHR11711:SF215
InterPro:RBD_domain_sfInterPro:RRM_domSMART:SM00177SUPFAM:SSF52540SUPFAM:SSF54928InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARFInterPro:Small_GTPase_ARF/SARTIGRFAMs:TIGR00231TMHMM:TMhelixUniParc:UPI0004EEF3B4SEG:seg
Description
BnaC09g20250DBnaC09g20250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLC3]
Coordinates
chrLK032183:-:344628..346379
Molecular Weight (calculated)
31325.8 Da
IEP (calculated)
9.060
GRAVY (calculated)
0.258
Length
277 amino acids
Sequence
(BLAST)
001: MRHCVMRLPA VARAATEMAS ALVGLRCLFC SLRLRGWSGC LVPSESYFLA KSLKRMARVK ASVLFSSIRS SLLSLLVLPP TALWLMARNC LWPKFINKGE
101: RAAMSGNQEF TNVYVKNLLE SVTEDFLHTM FSQCGTVSSV VVMRDGTLEL VLDMMQSKAK MGLDFAKLVM VGLDAAGKTT ILYKLKLGEI VTTIPIIDKL
201: FFSICEMSFN VETVEYRNIS FIVWDVGGQD KIRPLWKYYF QNTQGLIFVV DSNDRDRVVE ARDELHRMLN EVTGMFL
Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)
001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
Arabidopsis Description
ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.