CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36479	Canola	cytosol	99.46	99.46
AT2G18390.1	Thale cress	cytosol	98.92	98.92
Bra024470.1-P	Field mustard	cytosol	98.38	98.38
KRH76824	Soybean	cytosol	94.59	94.59
KRH28677	Soybean	cytosol	94.59	94.59
VIT_04s0023g01820.t01	Wine grape	cytosol	92.43	92.43
TraesCS1B01G453100.1	Wheat	cytosol	58.92	92.37
Solyc07g014650.2.1	Tomato	cytosol	82.7	90.53
TraesCS5A01G014900.1	Wheat	cytosol	89.73	89.73
TraesCS5D01G020800.1	Wheat	cytosol	89.73	89.73
TraesCS5B01G013100.1	Wheat	cytosol	89.19	89.19
GSMUA_Achr9P26270_001	Banana	cytosol	89.19	89.19
TraesCS1D01G429700.1	Wheat	cytosol	89.19	89.19
KXG37868	Sorghum	cytosol	89.19	89.19
Os02t0327100-01	Rice	cytosol	87.03	87.03
PGSC0003DMT400043258	Potato	cytosol	44.86	83.84
TraesCS1A01G421700.1	Wheat	cytosol	88.65	83.25
CDY13039	Canola	cytosol	100.0	75.51
HORVU5Hr1G004340.2	Barley	cytosol, plastid	89.73	69.75
TraesCS4A01G292900.1	Wheat	cytosol	45.41	67.2
TraesCS4D01G018600.1	Wheat	cytosol	51.89	65.75
HORVU5Hr1G002120.6	Barley	cytosol, plastid	89.19	64.96
Zm00001d033414_P001	Maize	extracellular	88.65	64.57
CDY53050	Canola	cytosol	47.57	48.62
CDY51415	Canola	cytosol	47.03	48.07
CDY27506	Canola	cytosol	47.03	48.07
CDY47221	Canola	mitochondrion	47.03	48.07
CDY47137	Canola	peroxisome	47.03	48.07
CDX80083	Canola	cytosol	47.03	48.07
CDX89139	Canola	cytosol	47.03	48.07
CDY37791	Canola	cytosol	47.03	48.07
CDY04706	Canola	mitochondrion, peroxisome	46.49	47.51
CDY09441	Canola	mitochondrion, peroxisome	46.49	47.51
CDY03747	Canola	mitochondrion, peroxisome	46.49	47.51
CDY54291	Canola	mitochondrion, peroxisome	46.49	47.51
CDX93979	Canola	mitochondrion, peroxisome	46.49	47.51
CDY44152	Canola	mitochondrion, peroxisome	46.49	47.51
CDX91717	Canola	mitochondrion	46.49	47.51
CDY41444	Canola	mitochondrion	46.49	47.51
CDY11588	Canola	mitochondrion, peroxisome	46.49	47.51
CDY25787	Canola	mitochondrion, peroxisome	46.49	47.51
CDX95712	Canola	cytosol	47.03	45.79
CDX83340	Canola	cytosol	46.49	45.03
CDX75849	Canola	cytosol	27.57	44.35
CDX68343	Canola	cytosol	43.24	43.96
CDX75192	Canola	cytosol	42.7	43.41
CDX68781	Canola	cytosol	42.7	43.41
CDY34756	Canola	cytosol	42.16	42.86
CDY45596	Canola	cytosol	42.16	42.86
CDX76793	Canola	cytosol	42.16	42.86
CDX69567	Canola	mitochondrion	45.95	41.26
CDY36172	Canola	cytosol	40.0	40.66
CDX69406	Canola	cytosol	41.62	40.1
CDY16963	Canola	cytosol	41.62	40.1
CDY09875	Canola	mitochondrion	45.95	39.91
CDY43149	Canola	cytosol	41.08	39.58
CDY28739	Canola	cytosol	41.08	39.58
CDY23463	Canola	cytosol	41.08	39.58
CDY53727	Canola	cytosol	37.3	37.7
CDY36874	Canola	cytosol	37.3	37.7
CDY29751	Canola	cytosol	37.3	37.7
CDY16265	Canola	cytosol	37.3	37.7
CDY48224	Canola	mitochondrion	41.62	37.56
CDY23500	Canola	cytosol	42.7	36.92
CDX71216	Canola	mitochondrion	41.62	36.84
CDY00519	Canola	cytosol	34.59	31.07
CDY31913	Canola	cytosol	34.59	31.07
CDY38908	Canola	cytosol	34.05	30.73
CDY32591	Canola	cytosol	34.05	24.9
CDY25962	Canola	mitochondrion	25.95	17.33

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:A0A078GUK8	UniProt:A0A078GUK8	EnsemblPlants:CDY29231
ProteinID:CDY29231	ProteinID:CDY29231.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00042159001	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000254110A
SEG:seg	:	:	:	:	:

Description

BnaA06g25260DBnaA06g25260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUK8]

Coordinates

chrLK032233:+:407514..408754

Molecular Weight (calculated)

21110.7 Da

IEP (calculated)

6.013

GRAVY (calculated)

-0.214

Length

185 amino acids

Sequence
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKMNGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPEEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.