CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039613.1-P	Field mustard	cytosol	75.51	100.0
CDY29231	Canola	cytosol	75.51	100.0
CDY36479	Canola	cytosol	75.1	99.46
AT2G18390.1	Thale cress	cytosol	74.69	98.92
KRH28677	Soybean	cytosol	71.43	94.59
KRH76824	Soybean	cytosol	71.43	94.59
VIT_04s0023g01820.t01	Wine grape	cytosol	69.8	92.43
TraesCS1B01G453100.1	Wheat	cytosol	44.49	92.37
Solyc07g014650.2.1	Tomato	cytosol	62.45	90.53
TraesCS5A01G014900.1	Wheat	cytosol	67.76	89.73
TraesCS5D01G020800.1	Wheat	cytosol	67.76	89.73
TraesCS1D01G429700.1	Wheat	cytosol	67.35	89.19
KXG37868	Sorghum	cytosol	67.35	89.19
TraesCS5B01G013100.1	Wheat	cytosol	67.35	89.19
GSMUA_Achr9P26270_001	Banana	cytosol	67.35	89.19
Os02t0327100-01	Rice	cytosol	65.71	87.03
PGSC0003DMT400043258	Potato	cytosol	33.88	83.84
TraesCS1A01G421700.1	Wheat	cytosol	66.94	83.25
HORVU5Hr1G004340.2	Barley	cytosol, plastid	67.76	69.75
TraesCS4A01G292900.1	Wheat	cytosol	34.29	67.2
TraesCS4D01G018600.1	Wheat	cytosol	39.59	66.44
HORVU5Hr1G002120.6	Barley	cytosol, plastid	67.35	64.96
Zm00001d033414_P001	Maize	extracellular	66.94	64.57
CDY53050	Canola	cytosol	35.92	48.62
CDX89139	Canola	cytosol	35.51	48.07
CDY47137	Canola	peroxisome	35.51	48.07
CDY37791	Canola	cytosol	35.51	48.07
CDY27506	Canola	cytosol	35.51	48.07
CDX80083	Canola	cytosol	35.51	48.07
CDY47221	Canola	mitochondrion	35.51	48.07
CDY51415	Canola	cytosol	35.51	48.07
CDY44152	Canola	mitochondrion, peroxisome	35.1	47.51
CDY41444	Canola	mitochondrion	35.1	47.51
CDY11588	Canola	mitochondrion, peroxisome	35.1	47.51
CDX91717	Canola	mitochondrion	35.1	47.51
CDX93979	Canola	mitochondrion, peroxisome	35.1	47.51
CDY54291	Canola	mitochondrion, peroxisome	35.1	47.51
CDY09441	Canola	mitochondrion, peroxisome	35.1	47.51
CDY04706	Canola	mitochondrion, peroxisome	35.1	47.51
CDY25787	Canola	mitochondrion, peroxisome	35.1	47.51
CDY03747	Canola	mitochondrion, peroxisome	35.1	47.51
CDX95712	Canola	cytosol	35.51	45.79
CDX83340	Canola	cytosol	35.1	45.03
CDX75849	Canola	cytosol	20.82	44.35
CDX68343	Canola	cytosol	32.65	43.96
CDX75192	Canola	cytosol	32.24	43.41
CDX68781	Canola	cytosol	32.24	43.41
CDY45596	Canola	cytosol	31.84	42.86
CDY34756	Canola	cytosol	31.84	42.86
CDX76793	Canola	cytosol	31.84	42.86
CDX69567	Canola	mitochondrion	34.69	41.26
CDY36172	Canola	cytosol	30.2	40.66
CDX69406	Canola	cytosol	31.43	40.1
CDY16963	Canola	cytosol	31.43	40.1
CDY09875	Canola	mitochondrion	34.69	39.91
CDY23463	Canola	cytosol	31.02	39.58
CDY43149	Canola	cytosol	31.02	39.58
CDY28739	Canola	cytosol	31.02	39.58
CDY53727	Canola	cytosol	28.16	37.7
CDY36874	Canola	cytosol	28.16	37.7
CDY29751	Canola	cytosol	28.16	37.7
CDY16265	Canola	cytosol	28.16	37.7
CDY48224	Canola	mitochondrion	31.43	37.56
CDY23500	Canola	cytosol	32.24	36.92
CDX71216	Canola	mitochondrion	31.43	36.84
CDY00519	Canola	cytosol	26.12	31.07
CDY31913	Canola	cytosol	26.12	31.07
CDY38908	Canola	cytosol	25.71	30.73
CDY32591	Canola	cytosol	25.71	24.9
CDY25962	Canola	mitochondrion	19.59	17.33

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:A0A078FJ97	UniProt:A0A078FJ97	EnsemblPlants:CDY13039
ProteinID:CDY13039	ProteinID:CDY13039.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00070844001	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0004EEF54D
SEG:seg	:	:	:	:	:

Description

BnaC07g03380DBnaC07g03380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJ97]

Coordinates

chrLK032030:-:756617..759022

Molecular Weight (calculated)

27666.6 Da

IEP (calculated)

5.463

GRAVY (calculated)

-0.178

Length

245 amino acids

Sequence
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKMNGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPEEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLRLAGSSL LILANKQDIQ GALTPEEIGK
201: VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.