Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- endoplasmic reticulum 1
- golgi 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra021371.1-P | Field mustard | cytosol | 100.0 | 100.0 |
CDY28739 | Canola | cytosol | 97.4 | 97.4 |
CDY43149 | Canola | cytosol | 97.4 | 97.4 |
AT3G03120.1 | Thale cress | cytosol | 96.35 | 96.35 |
CDY16963 | Canola | cytosol | 93.75 | 93.75 |
CDX69406 | Canola | cytosol | 93.75 | 93.75 |
Solyc06g072800.2.1 | Tomato | cytosol | 64.06 | 93.18 |
Solyc03g096910.2.1 | Tomato | cytosol | 63.02 | 91.67 |
VIT_16s0039g02240.t01 | Wine grape | cytosol | 90.62 | 90.16 |
PGSC0003DMT400069538 | Potato | cytosol | 90.1 | 89.64 |
KRH27742 | Soybean | cytosol | 90.1 | 89.64 |
KRH77702 | Soybean | cytosol | 81.77 | 89.2 |
KRH29023 | Soybean | cytosol | 89.58 | 88.21 |
PGSC0003DMT400001454 | Potato | cytosol | 88.54 | 88.08 |
KRH24049 | Soybean | cytosol | 89.06 | 87.69 |
TraesCS6A01G268000.1 | Wheat | cytosol | 85.94 | 86.39 |
TraesCS6D01G246900.1 | Wheat | cytosol | 85.42 | 85.86 |
EES07411 | Sorghum | cytosol | 85.42 | 84.54 |
Zm00001d051546_P001 | Maize | cytosol | 84.38 | 83.51 |
GSMUA_AchrUn_... | Banana | cytosol | 78.65 | 81.18 |
GSMUA_Achr7P04780_001 | Banana | cytosol | 79.17 | 80.85 |
Os02t0699300-01 | Rice | cytosol, extracellular, plastid | 48.44 | 75.0 |
Zm00001d017717_P001 | Maize | cytosol | 85.42 | 74.21 |
HORVU6Hr1G067840.2 | Barley | cytosol | 85.94 | 59.14 |
CDX89139 | Canola | cytosol | 55.21 | 58.56 |
CDY51415 | Canola | cytosol | 55.21 | 58.56 |
CDY53050 | Canola | cytosol | 55.21 | 58.56 |
CDY47221 | Canola | mitochondrion | 55.21 | 58.56 |
CDY47137 | Canola | peroxisome | 55.21 | 58.56 |
CDY54291 | Canola | mitochondrion, peroxisome | 55.21 | 58.56 |
CDY44152 | Canola | mitochondrion, peroxisome | 55.21 | 58.56 |
CDY41444 | Canola | mitochondrion | 55.21 | 58.56 |
CDY37791 | Canola | cytosol | 55.21 | 58.56 |
CDX93979 | Canola | mitochondrion, peroxisome | 55.21 | 58.56 |
CDX91717 | Canola | mitochondrion | 55.21 | 58.56 |
CDX80083 | Canola | cytosol | 55.21 | 58.56 |
CDY03747 | Canola | mitochondrion, peroxisome | 55.21 | 58.56 |
CDY27506 | Canola | cytosol | 55.21 | 58.56 |
CDY25787 | Canola | mitochondrion, peroxisome | 55.21 | 58.56 |
CDY04706 | Canola | mitochondrion, peroxisome | 55.21 | 58.56 |
CDY11588 | Canola | mitochondrion, peroxisome | 55.21 | 58.56 |
CDY09441 | Canola | mitochondrion, peroxisome | 55.21 | 58.56 |
TraesCS6B01G295200.1 | Wheat | plastid | 74.48 | 58.13 |
CDX95712 | Canola | cytosol | 56.25 | 56.84 |
CDX75192 | Canola | cytosol | 53.65 | 56.59 |
CDX68781 | Canola | cytosol | 53.65 | 56.59 |
CDX83340 | Canola | cytosol | 56.25 | 56.54 |
CDX68343 | Canola | cytosol | 53.12 | 56.04 |
CDY45596 | Canola | cytosol | 53.12 | 56.04 |
CDY34756 | Canola | cytosol | 53.12 | 56.04 |
CDX76793 | Canola | cytosol | 52.6 | 55.49 |
CDX75849 | Canola | cytosol | 32.81 | 54.78 |
CDY36172 | Canola | cytosol | 51.56 | 54.4 |
CDX69567 | Canola | mitochondrion | 55.21 | 51.46 |
CDY09875 | Canola | mitochondrion | 55.21 | 49.77 |
CDY23500 | Canola | cytosol | 53.65 | 48.13 |
CDY29751 | Canola | cytosol | 45.83 | 48.09 |
CDY16265 | Canola | cytosol | 45.83 | 48.09 |
CDY48224 | Canola | mitochondrion | 51.04 | 47.8 |
CDY36874 | Canola | cytosol | 45.31 | 47.54 |
CDY53727 | Canola | cytosol | 45.31 | 47.54 |
CDX71216 | Canola | mitochondrion | 51.04 | 46.89 |
CDY29231 | Canola | cytosol | 39.58 | 41.08 |
CDY36479 | Canola | cytosol | 39.58 | 41.08 |
CDY13039 | Canola | cytosol | 39.58 | 31.02 |
CDY38908 | Canola | cytosol | 30.73 | 28.78 |
CDY31913 | Canola | cytosol | 30.73 | 28.64 |
CDY00519 | Canola | cytosol | 30.73 | 28.64 |
CDY32591 | Canola | cytosol | 30.73 | 23.32 |
CDY25962 | Canola | mitochondrion | 33.33 | 23.1 |
Protein Annotations
MapMan:22.3.2.1 | Gene3D:3.40.50.300 | GO:A0A078GFQ1 | UniProt:A0A078GFQ1 | EnsemblPlants:CDY23463 | ProteinID:CDY23463 |
ProteinID:CDY23463.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00022081001 | InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 |
PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF300 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 |
InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI0002544E82 | : |
Description
BnaC04g49910DBnaC04g49910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFQ1]
Coordinates
chrLK032143:-:599494..600968
Molecular Weight (calculated)
21783.4 Da
IEP (calculated)
7.503
GRAVY (calculated)
-0.160
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVMSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSSTLTEV RAAGYSSVGP SF
101: GKAKQEFQEI IKDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSSTLTEV RAAGYSSVGP SF
001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VIFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSATLKEV KAAGYSSVGP SF
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSATLKEV KAAGYSSVGP SF
Arabidopsis Description
ATARFB1CATARFB1C [Source:UniProtKB/TrEMBL;Acc:A0A178VH47]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.