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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • endoplasmic reticulum 1
  • golgi 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021371.1-P Field mustard cytosol 100.0 100.0
CDY28739 Canola cytosol 97.4 97.4
CDY43149 Canola cytosol 97.4 97.4
AT3G03120.1 Thale cress cytosol 96.35 96.35
CDY16963 Canola cytosol 93.75 93.75
CDX69406 Canola cytosol 93.75 93.75
Solyc06g072800.2.1 Tomato cytosol 64.06 93.18
Solyc03g096910.2.1 Tomato cytosol 63.02 91.67
VIT_16s0039g02240.t01 Wine grape cytosol 90.62 90.16
PGSC0003DMT400069538 Potato cytosol 90.1 89.64
KRH27742 Soybean cytosol 90.1 89.64
KRH77702 Soybean cytosol 81.77 89.2
KRH29023 Soybean cytosol 89.58 88.21
PGSC0003DMT400001454 Potato cytosol 88.54 88.08
KRH24049 Soybean cytosol 89.06 87.69
TraesCS6A01G268000.1 Wheat cytosol 85.94 86.39
TraesCS6D01G246900.1 Wheat cytosol 85.42 85.86
EES07411 Sorghum cytosol 85.42 84.54
Zm00001d051546_P001 Maize cytosol 84.38 83.51
GSMUA_AchrUn_... Banana cytosol 78.65 81.18
GSMUA_Achr7P04780_001 Banana cytosol 79.17 80.85
Os02t0699300-01 Rice cytosol, extracellular, plastid 48.44 75.0
Zm00001d017717_P001 Maize cytosol 85.42 74.21
HORVU6Hr1G067840.2 Barley cytosol 85.94 59.14
CDX89139 Canola cytosol 55.21 58.56
CDY51415 Canola cytosol 55.21 58.56
CDY53050 Canola cytosol 55.21 58.56
CDY47221 Canola mitochondrion 55.21 58.56
CDY47137 Canola peroxisome 55.21 58.56
CDY54291 Canola mitochondrion, peroxisome 55.21 58.56
CDY44152 Canola mitochondrion, peroxisome 55.21 58.56
CDY41444 Canola mitochondrion 55.21 58.56
CDY37791 Canola cytosol 55.21 58.56
CDX93979 Canola mitochondrion, peroxisome 55.21 58.56
CDX91717 Canola mitochondrion 55.21 58.56
CDX80083 Canola cytosol 55.21 58.56
CDY03747 Canola mitochondrion, peroxisome 55.21 58.56
CDY27506 Canola cytosol 55.21 58.56
CDY25787 Canola mitochondrion, peroxisome 55.21 58.56
CDY04706 Canola mitochondrion, peroxisome 55.21 58.56
CDY11588 Canola mitochondrion, peroxisome 55.21 58.56
CDY09441 Canola mitochondrion, peroxisome 55.21 58.56
TraesCS6B01G295200.1 Wheat plastid 74.48 58.13
CDX95712 Canola cytosol 56.25 56.84
CDX75192 Canola cytosol 53.65 56.59
CDX68781 Canola cytosol 53.65 56.59
CDX83340 Canola cytosol 56.25 56.54
CDX68343 Canola cytosol 53.12 56.04
CDY45596 Canola cytosol 53.12 56.04
CDY34756 Canola cytosol 53.12 56.04
CDX76793 Canola cytosol 52.6 55.49
CDX75849 Canola cytosol 32.81 54.78
CDY36172 Canola cytosol 51.56 54.4
CDX69567 Canola mitochondrion 55.21 51.46
CDY09875 Canola mitochondrion 55.21 49.77
CDY23500 Canola cytosol 53.65 48.13
CDY29751 Canola cytosol 45.83 48.09
CDY16265 Canola cytosol 45.83 48.09
CDY48224 Canola mitochondrion 51.04 47.8
CDY36874 Canola cytosol 45.31 47.54
CDY53727 Canola cytosol 45.31 47.54
CDX71216 Canola mitochondrion 51.04 46.89
CDY29231 Canola cytosol 39.58 41.08
CDY36479 Canola cytosol 39.58 41.08
CDY13039 Canola cytosol 39.58 31.02
CDY38908 Canola cytosol 30.73 28.78
CDY31913 Canola cytosol 30.73 28.64
CDY00519 Canola cytosol 30.73 28.64
CDY32591 Canola cytosol 30.73 23.32
CDY25962 Canola mitochondrion 33.33 23.1
Protein Annotations
MapMan:22.3.2.1Gene3D:3.40.50.300GO:A0A078GFQ1UniProt:A0A078GFQ1EnsemblPlants:CDY23463ProteinID:CDY23463
ProteinID:CDY23463.1GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0007264GO:GO:0008150
GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00022081001InterPro:IPR024156InterPro:P-loop_NTPasePFAM:PF00025PRINTS:PR00328
PFscan:PS51417PANTHER:PTHR11711PANTHER:PTHR11711:SF300SMART:SM00177SMART:SM00178SUPFAM:SSF52540
InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARFInterPro:Small_GTPase_ARF/SARTIGRFAMs:TIGR00231UniParc:UPI0002544E82:
Description
BnaC04g49910DBnaC04g49910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFQ1]
Coordinates
chrLK032143:-:599494..600968
Molecular Weight (calculated)
21783.4 Da
IEP (calculated)
7.503
GRAVY (calculated)
-0.160
Length
192 amino acids
Sequence
(BLAST)
001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVMSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSSTLTEV RAAGYSSVGP SF
Best Arabidopsis Sequence Match ( AT3G03120.1 )
(BLAST)
001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VIFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSATLKEV KAAGYSSVGP SF
Arabidopsis Description
ATARFB1CATARFB1C [Source:UniProtKB/TrEMBL;Acc:A0A178VH47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.