CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77702	Soybean	cytosol	89.64	98.3
Solyc06g072800.2.1	Tomato	cytosol	64.25	93.94
Solyc03g096910.2.1	Tomato	cytosol	63.73	93.18
VIT_16s0039g02240.t01	Wine grape	cytosol	92.75	92.75
KRH29023	Soybean	cytosol	93.26	92.31
PGSC0003DMT400001454	Potato	cytosol	92.23	92.23
PGSC0003DMT400069538	Potato	cytosol	92.23	92.23
KRH24049	Soybean	cytosol	92.75	91.79
AT3G03120.1	Thale cress	cytosol	91.19	91.67
AT5G17060.2	Thale cress	cytosol	90.16	90.62
CDY43149	Canola	cytosol	89.64	90.1
CDY28739	Canola	cytosol	89.64	90.1
CDY23463	Canola	cytosol	89.64	90.1
Bra032015.1-P	Field mustard	cytosol	89.64	90.1
Bra021371.1-P	Field mustard	cytosol	89.64	90.1
CDY16963	Canola	cytosol	89.12	89.58
CDX69406	Canola	cytosol	89.12	89.58
Bra008579.1-P	Field mustard	cytosol	88.6	89.06
TraesCS6A01G268000.1	Wheat	cytosol	88.08	89.01
TraesCS6D01G246900.1	Wheat	cytosol	87.56	88.48
EES07411	Sorghum	cytosol	88.08	87.63
Zm00001d051546_P001	Maize	cytosol	87.05	86.6
GSMUA_AchrUn_...	Banana	cytosol	80.83	83.87
GSMUA_Achr7P04780_001	Banana	cytosol	80.83	82.98
Zm00001d017717_P001	Maize	cytosol	87.05	76.02
Os02t0699300-01	Rice	cytosol, extracellular, plastid	48.19	75.0
HORVU6Hr1G067840.2	Barley	cytosol	87.56	60.57
TraesCS6B01G295200.1	Wheat	plastid	76.17	59.76
KRG99354	Soybean	mitochondrion	54.92	58.56
KRH69574	Soybean	endoplasmic reticulum, nucleus	54.92	58.56
KRG96566	Soybean	mitochondrion	54.92	58.56
KRH56584	Soybean	mitochondrion	54.92	58.56
KRH45651	Soybean	mitochondrion	54.92	58.56
KRG93262	Soybean	nucleus	54.92	58.56
KRG90489	Soybean	mitochondrion	54.92	58.56
KRH02913	Soybean	cytosol	50.26	58.43
KRH36902	Soybean	endoplasmic reticulum	55.44	58.15
KRH31758	Soybean	mitochondrion	55.44	58.15
KRH18982	Soybean	endoplasmic reticulum	51.81	58.14
KRH33780	Soybean	mitochondrion, peroxisome	54.4	58.01
KRH74584	Soybean	nucleus	56.48	57.37
KRH77051	Soybean	mitochondrion	53.89	57.14
KRH07000	Soybean	extracellular, golgi	32.64	52.07
KRH69176	Soybean	endoplasmic reticulum	55.44	47.98
KRG92448	Soybean	endoplasmic reticulum	45.08	47.54
KRG92441	Soybean	endoplasmic reticulum	45.08	47.54
KRH34351	Soybean	endoplasmic reticulum	45.08	47.54
KRH34356	Soybean	cytosol, extracellular	32.12	44.6
KRH76824	Soybean	cytosol	39.38	41.08
KRH28677	Soybean	cytosol	39.38	41.08
KRH20906	Soybean	endoplasmic reticulum	31.09	29.41
KRH11380	Soybean	endoplasmic reticulum	31.09	29.41

Protein Annotations

EntrezGene:100791271	MapMan:22.3.2.1	Gene3D:3.40.50.300	EMBL:ACUP02006733	EnsemblPlantsGene:GLYMA_11G011800	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	UniProt:I1LG16
InterPro:IPR024156	ProteinID:KRH27741.1	EnsemblPlants:KRH27742	ProteinID:KRH27742	ProteinID:KRH27742.1	ProteinID:KRH27743.1
InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF300
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI000233CE26	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:827841..831466

Molecular Weight (calculated)

21807.5 Da

IEP (calculated)

8.660

GRAVY (calculated)

-0.097

Length

193 amino acids

Sequence
(BLAST)

001: MGQAFRKLFD TFFGNTEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VIFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQTI INDPFMLNSV ILVFANKQDL RGAMTPMEVC EGLGLFDLKN RKWHIHGTCA LKGDGLYEGL DWLASTLKER KAAGYSSIGT SSF

Best Arabidopsis Sequence Match ( AT3G03120.1 )
(BLAST)

001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VIFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSATLKEV KAAGYSSVGP SF

Arabidopsis Description

ATARFB1CATARFB1C [Source:UniProtKB/TrEMBL;Acc:A0A178VH47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.