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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • endoplasmic reticulum 1
  • golgi 1
  • plasma membrane 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G268000.1 Wheat cytosol 67.74 98.95
TraesCS6D01G246900.1 Wheat cytosol 67.38 98.43
EES07411 Sorghum cytosol 66.31 95.36
Solyc06g072800.2.1 Tomato cytosol 44.8 94.7
Zm00001d051546_P001 Maize cytosol 65.59 94.33
Solyc03g096910.2.1 Tomato cytosol 44.44 93.94
PGSC0003DMT400069538 Potato cytosol 63.08 91.19
VIT_16s0039g02240.t01 Wine grape cytosol 62.37 90.16
HORVU1Hr1G051350.1 Barley cytosol 60.57 88.48
PGSC0003DMT400001454 Potato cytosol 60.93 88.08
KRH27742 Soybean cytosol 60.57 87.56
AT5G17060.2 Thale cress cytosol 60.22 87.5
Bra032015.1-P Field mustard cytosol 59.86 86.98
CDY28739 Canola cytosol 59.86 86.98
CDY43149 Canola cytosol 59.86 86.98
KRH77702 Soybean cytosol 54.84 86.93
AT3G03120.1 Thale cress cytosol 59.5 86.46
CDX69406 Canola cytosol 59.5 86.46
CDY16963 Canola cytosol 59.5 86.46
Bra008579.1-P Field mustard cytosol 59.14 85.94
Bra021371.1-P Field mustard cytosol 59.14 85.94
CDY23463 Canola cytosol 59.14 85.94
GSMUA_Achr7P04780_001 Banana cytosol 57.71 85.64
GSMUA_AchrUn_... Banana cytosol 56.99 85.48
KRH29023 Soybean cytosol 58.78 84.1
KRH24049 Soybean cytosol 58.42 83.59
Zm00001d017717_P001 Maize cytosol 65.23 82.35
TraesCS6B01G295200.1 Wheat plastid 69.18 78.46
Os02t0699300-01 Rice cytosol, extracellular, plastid 34.05 76.61
HORVU6Hr1G016100.1 Barley cytosol, mitochondrion 50.54 69.8
HORVU7Hr1G061220.1 Barley cytosol, mitochondrion 35.13 53.85
HORVU1Hr1G068790.1 Barley plastid 39.78 47.03
HORVU4Hr1G038090.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 30.47 46.2
HORVU5Hr1G045440.2 Barley cytosol, plastid 41.58 46.03
HORVU5Hr1G111500.2 Barley mitochondrion 38.35 45.73
HORVU0Hr1G027130.1 Barley plasma membrane 39.78 43.7
HORVU2Hr1G054780.5 Barley cytosol 24.37 39.77
HORVU3Hr1G079700.1 Barley cytosol 40.86 36.66
HORVU5Hr1G004340.2 Barley cytosol, plastid 28.32 33.19
HORVU5Hr1G002120.6 Barley cytosol, plastid 28.67 31.5
HORVU1Hr1G014610.1 Barley cytosol 21.51 29.56
Protein Annotations
MapMan:22.3.2.1Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005525
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0007264
GO:GO:0008150GO:GO:0009987EnsemblPlantsGene:HORVU6Hr1G067840EnsemblPlants:HORVU6Hr1G067840.2InterPro:IPR024156UniProt:M0UGK5
InterPro:P-loop_NTPasePFAM:PF00025PRINTS:PR00328PFscan:PS51417PANTHER:PTHR11711PANTHER:PTHR11711:SF300
SMART:SM00177SMART:SM00178SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARFInterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231UniParc:UPI000294D542SEG:seg:::
Description
Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0UGK5]
Coordinates
chrchr6H:+:470878782..470882052
Molecular Weight (calculated)
31685.0 Da
IEP (calculated)
9.304
GRAVY (calculated)
-0.431
Length
279 amino acids
Sequence
(BLAST)
001: MLFSQTYSHQ PEARPDSSRP EGVATNKRCF HEKGSSFLLH LFYSVTRVRR RRRRLEGEGQ EEGTPERFDG DFAVRPSDSQ RSADLRRRMG QAFRKLFDAF
101: FGNSEMRVVM LGLDAAGKTT ILYKLHIGEV LSTVPTIGFN VEKVQYKNVL FTVWDVGGQE KLRPLWRHYF NNTDGLIYVV DSLDRERIGK AKAEFQAIIN
201: DPFMLNSVIL VFANKQDMKG AMTPMEVCEG LGLYDLKNRM WHIQGSCALK GDGLYEGLDW LSSTLKDLQA SGRLPSGGT
Best Arabidopsis Sequence Match ( AT5G17060.2 )
(BLAST)
001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
Arabidopsis Description
ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.