Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- endoplasmic reticulum 1
- golgi 1
- plasma membrane 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G268000.1 | Wheat | cytosol | 67.74 | 98.95 |
TraesCS6D01G246900.1 | Wheat | cytosol | 67.38 | 98.43 |
EES07411 | Sorghum | cytosol | 66.31 | 95.36 |
Solyc06g072800.2.1 | Tomato | cytosol | 44.8 | 94.7 |
Zm00001d051546_P001 | Maize | cytosol | 65.59 | 94.33 |
Solyc03g096910.2.1 | Tomato | cytosol | 44.44 | 93.94 |
PGSC0003DMT400069538 | Potato | cytosol | 63.08 | 91.19 |
VIT_16s0039g02240.t01 | Wine grape | cytosol | 62.37 | 90.16 |
HORVU1Hr1G051350.1 | Barley | cytosol | 60.57 | 88.48 |
PGSC0003DMT400001454 | Potato | cytosol | 60.93 | 88.08 |
KRH27742 | Soybean | cytosol | 60.57 | 87.56 |
AT5G17060.2 | Thale cress | cytosol | 60.22 | 87.5 |
Bra032015.1-P | Field mustard | cytosol | 59.86 | 86.98 |
CDY28739 | Canola | cytosol | 59.86 | 86.98 |
CDY43149 | Canola | cytosol | 59.86 | 86.98 |
KRH77702 | Soybean | cytosol | 54.84 | 86.93 |
AT3G03120.1 | Thale cress | cytosol | 59.5 | 86.46 |
CDX69406 | Canola | cytosol | 59.5 | 86.46 |
CDY16963 | Canola | cytosol | 59.5 | 86.46 |
Bra008579.1-P | Field mustard | cytosol | 59.14 | 85.94 |
Bra021371.1-P | Field mustard | cytosol | 59.14 | 85.94 |
CDY23463 | Canola | cytosol | 59.14 | 85.94 |
GSMUA_Achr7P04780_001 | Banana | cytosol | 57.71 | 85.64 |
GSMUA_AchrUn_... | Banana | cytosol | 56.99 | 85.48 |
KRH29023 | Soybean | cytosol | 58.78 | 84.1 |
KRH24049 | Soybean | cytosol | 58.42 | 83.59 |
Zm00001d017717_P001 | Maize | cytosol | 65.23 | 82.35 |
TraesCS6B01G295200.1 | Wheat | plastid | 69.18 | 78.46 |
Os02t0699300-01 | Rice | cytosol, extracellular, plastid | 34.05 | 76.61 |
HORVU6Hr1G016100.1 | Barley | cytosol, mitochondrion | 50.54 | 69.8 |
HORVU7Hr1G061220.1 | Barley | cytosol, mitochondrion | 35.13 | 53.85 |
HORVU1Hr1G068790.1 | Barley | plastid | 39.78 | 47.03 |
HORVU4Hr1G038090.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.47 | 46.2 |
HORVU5Hr1G045440.2 | Barley | cytosol, plastid | 41.58 | 46.03 |
HORVU5Hr1G111500.2 | Barley | mitochondrion | 38.35 | 45.73 |
HORVU0Hr1G027130.1 | Barley | plasma membrane | 39.78 | 43.7 |
HORVU2Hr1G054780.5 | Barley | cytosol | 24.37 | 39.77 |
HORVU3Hr1G079700.1 | Barley | cytosol | 40.86 | 36.66 |
HORVU5Hr1G004340.2 | Barley | cytosol, plastid | 28.32 | 33.19 |
HORVU5Hr1G002120.6 | Barley | cytosol, plastid | 28.67 | 31.5 |
HORVU1Hr1G014610.1 | Barley | cytosol | 21.51 | 29.56 |
Protein Annotations
MapMan:22.3.2.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 |
GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:HORVU6Hr1G067840 | EnsemblPlants:HORVU6Hr1G067840.2 | InterPro:IPR024156 | UniProt:M0UGK5 |
InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF300 |
SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR |
TIGRFAMs:TIGR00231 | UniParc:UPI000294D542 | SEG:seg | : | : | : |
Description
Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0UGK5]
Coordinates
chrchr6H:+:470878782..470882052
Molecular Weight (calculated)
31685.0 Da
IEP (calculated)
9.304
GRAVY (calculated)
-0.431
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFSQTYSHQ PEARPDSSRP EGVATNKRCF HEKGSSFLLH LFYSVTRVRR RRRRLEGEGQ EEGTPERFDG DFAVRPSDSQ RSADLRRRMG QAFRKLFDAF
101: FGNSEMRVVM LGLDAAGKTT ILYKLHIGEV LSTVPTIGFN VEKVQYKNVL FTVWDVGGQE KLRPLWRHYF NNTDGLIYVV DSLDRERIGK AKAEFQAIIN
201: DPFMLNSVIL VFANKQDMKG AMTPMEVCEG LGLYDLKNRM WHIQGSCALK GDGLYEGLDW LSSTLKDLQA SGRLPSGGT
101: FGNSEMRVVM LGLDAAGKTT ILYKLHIGEV LSTVPTIGFN VEKVQYKNVL FTVWDVGGQE KLRPLWRHYF NNTDGLIYVV DSLDRERIGK AKAEFQAIIN
201: DPFMLNSVIL VFANKQDMKG AMTPMEVCEG LGLYDLKNRM WHIQGSCALK GDGLYEGLDW LSSTLKDLQA SGRLPSGGT
001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
Arabidopsis Description
ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.