Factsheet for HORVU3Hr1G079700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19719	Sorghum	mitochondrion	58.2	100.0
TraesCS3B01G368600.1	Wheat	mitochondrion	58.2	100.0
KRH69574	Soybean	endoplasmic reticulum, nucleus	57.88	99.45
KRH45651	Soybean	mitochondrion	57.88	99.45
KRG99354	Soybean	mitochondrion	57.88	99.45
PGSC0003DMT400035158	Potato	mitochondrion	57.88	99.45
Solyc05g005190.2.1	Tomato	nucleus	57.88	99.45
PGSC0003DMT400042276	Potato	mitochondrion	57.56	98.89
KRG90489	Soybean	mitochondrion	57.56	98.89
KRG96566	Soybean	mitochondrion	57.56	98.89
KRH33780	Soybean	mitochondrion, peroxisome	57.23	98.34
VIT_05s0020g00490.t01	Wine grape	cytosol	57.56	96.76
Bra008746.1-P	Field mustard	mitochondrion	57.23	94.18
VIT_01s0127g00440.t01	Wine grape	cytosol, mitochondrion	57.56	91.33
HORVU1Hr1G068790.1	Barley	plastid	60.77	80.08
HORVU5Hr1G111500.2	Barley	mitochondrion	56.91	75.64
HORVU0Hr1G027130.1	Barley	plasma membrane	61.74	75.59
HORVU5Hr1G045440.2	Barley	cytosol, plastid	57.56	71.03
VIT_07s0005g02000.t01	Wine grape	cytosol	59.16	67.15
HORVU2Hr1G054780.5	Barley	cytosol	35.05	63.74
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	35.05	59.89
HORVU1Hr1G051350.1	Barley	cytosol	34.73	56.54
VIT_14s0060g00690.t01	Wine grape	golgi	59.81	54.07
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.23	51.09
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	31.51	48.51
HORVU6Hr1G067840.2	Barley	cytosol	36.66	40.86
HORVU5Hr1G004340.2	Barley	cytosol, plastid	28.62	37.4
HORVU5Hr1G002120.6	Barley	cytosol, plastid	28.94	35.43
HORVU1Hr1G014610.1	Barley	cytosol	20.58	31.53

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A287LUS2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	EnsemblPlantsGene:HORVU3Hr1G079700	EnsemblPlants:HORVU3Hr1G079700.1
InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000B4847BC	:	:

Description

No Description!

Coordinates

chrchr3H:+:584539968..584542992

Molecular Weight (calculated)

35142.8 Da

IEP (calculated)

8.135

GRAVY (calculated)

-0.482

Length

311 amino acids

Sequence
(BLAST)

001: SIDSTFRKSA MLELNLTHIP EYRIVYEQNS GADEARTPVE APEEGAHAVR AACDWARCKG HVRMGLAPFY IAPPSGRPVS PPHRTARQPS SSSVRFPGSN
101: SHARLPRDQA EHARERRDPE SLRLHHPGAE MGLTFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG
201: QDKIRPLWRH YFQNTQGLIF VVDSNDRERV VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL
301: DWLSNNIANK A

Best Arabidopsis Sequence Match ( AT3G62290.2 )
(BLAST)

001: MGLSFGKLFS KLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A

Arabidopsis Description

ARFA1EADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.