Factsheet for HORVU5Hr1G002120.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G020800.1	Wheat	cytosol	72.44	99.46
TraesCS5A01G014900.1	Wheat	cytosol	72.44	99.46
TraesCS1B01G453100.1	Wheat	cytosol	46.06	99.15
TraesCS5B01G013100.1	Wheat	cytosol	71.65	98.38
TraesCS1D01G429700.1	Wheat	cytosol	70.87	97.3
TraesCS1A01G421700.1	Wheat	cytosol	73.62	94.92
KXG37868	Sorghum	cytosol	68.5	94.05
Os02t0327100-01	Rice	cytosol	66.54	91.35
AT2G18390.1	Thale cress	cytosol	65.75	90.27
Solyc07g014650.2.1	Tomato	cytosol	59.84	89.94
Bra039613.1-P	Field mustard	cytosol	64.96	89.19
CDY29231	Canola	cytosol	64.96	89.19
KRH28677	Soybean	cytosol	64.57	88.65
KRH76824	Soybean	cytosol	64.57	88.65
GSMUA_Achr9P26270_001	Banana	cytosol	64.57	88.65
CDY36479	Canola	cytosol	64.57	88.65
VIT_04s0023g01820.t01	Wine grape	cytosol	64.17	88.11
Bra024470.1-P	Field mustard	cytosol	63.78	87.57
HORVU5Hr1G004340.2	Barley	cytosol, plastid	78.74	84.03
PGSC0003DMT400043258	Potato	cytosol	32.68	83.84
Zm00001d033414_P001	Maize	extracellular	70.47	70.47
CDY13039	Canola	cytosol	64.96	67.35
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	29.92	41.76
HORVU1Hr1G051350.1	Barley	cytosol	30.71	40.84
HORVU1Hr1G068790.1	Barley	plastid	35.04	37.71
HORVU5Hr1G111500.2	Barley	mitochondrion	34.25	37.18
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	28.74	36.14
HORVU0Hr1G027130.1	Barley	plasma membrane	35.83	35.83
HORVU5Hr1G045440.2	Barley	cytosol, plastid	33.86	34.13
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.41	33.7
HORVU2Hr1G054780.5	Barley	cytosol	21.65	32.16
HORVU1Hr1G014610.1	Barley	cytosol	24.8	31.03
HORVU3Hr1G079700.1	Barley	cytosol	35.43	28.94
HORVU6Hr1G067840.2	Barley	cytosol	31.5	28.67

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A287Q7D3	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:HORVU5Hr1G002120	EnsemblPlants:HORVU5Hr1G002120.6	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328
PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	TMHMM:TMhelix	UniParc:UPI000B4654D8
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:6090580..6094177

Molecular Weight (calculated)

28293.1 Da

IEP (calculated)

9.932

GRAVY (calculated)

-0.174

Length

254 amino acids

Sequence
(BLAST)

001: ASPSHGPSSI RTPHLFTADL TLRFTSSGIS ITAAVAAAAL ASSRPRARPR SRRPCASLPA ARSFFLAPEM GLLSIIRKIK RKEKEMRILM VGLDNSGKTT
101: IVLKINGEDT SVISPTLGFN IKTIQYQKYS LNIWDVGGQK TIRSYWRNYF EQTDGLVWVV DSSDVRRLDD CRAELHNLLK EERLAGSSLL VFANKQDIQG
201: ALKPDEIANV LNLEVMNKDR HWKIVGCSAY TGDGLLQGFD WLVQDIASRI YVLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.