Factsheet for HORVU1Hr1G068790.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19719	Sorghum	mitochondrion	76.69	100.0
Os05t0489600-03	Rice	plasma membrane	76.69	100.0
Solyc05g005190.2.1	Tomato	nucleus	76.27	99.45
PGSC0003DMT400035158	Potato	mitochondrion	76.27	99.45
KRH69574	Soybean	endoplasmic reticulum, nucleus	76.27	99.45
KRH45651	Soybean	mitochondrion	76.27	99.45
KRG99354	Soybean	mitochondrion	76.27	99.45
KRG90489	Soybean	mitochondrion	75.85	98.89
PGSC0003DMT400042276	Potato	mitochondrion	75.85	98.89
KRG96566	Soybean	mitochondrion	75.85	98.89
KRH33780	Soybean	mitochondrion, peroxisome	75.42	98.34
VIT_05s0020g00490.t01	Wine grape	cytosol	75.85	96.76
Bra008746.1-P	Field mustard	mitochondrion	75.42	94.18
HORVU0Hr1G027130.1	Barley	plasma membrane	100.0	92.91
VIT_01s0127g00440.t01	Wine grape	cytosol, mitochondrion	75.85	91.33
HORVU5Hr1G111500.2	Barley	mitochondrion	75.0	75.64
TraesCS1D01G305900.1	Wheat	golgi	83.9	75.29
HORVU5Hr1G045440.2	Barley	cytosol, plastid	75.0	70.24
VIT_07s0005g02000.t01	Wine grape	cytosol	77.54	66.79
HORVU2Hr1G054780.5	Barley	cytosol	46.19	63.74
HORVU3Hr1G079700.1	Barley	cytosol	80.08	60.77
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	46.19	59.89
HORVU1Hr1G051350.1	Barley	cytosol	45.76	56.54
VIT_14s0060g00690.t01	Wine grape	golgi	78.81	54.07
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.83	51.09
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	41.53	48.51
HORVU6Hr1G067840.2	Barley	cytosol	47.03	39.78
HORVU5Hr1G004340.2	Barley	cytosol, plastid	36.44	36.13
HORVU5Hr1G002120.6	Barley	cytosol, plastid	37.71	35.04
HORVU1Hr1G014610.1	Barley	cytosol	27.12	31.53

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A287G2Q0	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006471
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016192	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G068790	EnsemblPlants:HORVU1Hr1G068790.1	InterPro:IPR024156	InterPro:P-loop_NTPase
PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI000B47A6B9	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:482236958..482241456

Molecular Weight (calculated)

26483.6 Da

IEP (calculated)

10.002

GRAVY (calculated)

-0.519

Length

236 amino acids

Sequence
(BLAST)

001: SLSLLHSSPP PPATDPKPGR NPARGGQRKR RGDHPADRAT ARTGQQPSRS RAGADMGLTF TKLFSRLFAK KEMRILMVGL DAAGKTTILY KLKLGEIVTT
101: IPTIGFNVET VEYKNISFTV WDVGGQDKIR PLWRHYFQNT QGLIFVVDSN DRERVVEARD ELHRMLNEDE LRDAVLLVFA NKQDLPNAMN AAEITDKLGL
201: HSLRQRHWYI QSTCATSGEG LYEGLDWLSN NIANKA

Best Arabidopsis Sequence Match ( AT5G14670.3 )
(BLAST)

001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIATK A

Arabidopsis Description

ATARFA1BADP-ribosylation factor A1B [Source:UniProtKB/TrEMBL;Acc:Q9LYJ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.