Factsheet for HORVU1Hr1G014610.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G069400.1	Wheat	peroxisome	97.04	97.04
TraesCS1B01G087700.1	Wheat	peroxisome	96.55	97.03
TraesCS1D01G072000.1	Wheat	peroxisome	96.55	96.55
TraesCS2D01G172000.1	Wheat	peroxisome	88.67	90.45
EER99714	Sorghum	cytosol	85.22	85.22
Os07t0620400-01	Rice	cytosol	82.76	82.76
TraesCS2B01G191100.2	Wheat	cytosol, plastid	79.8	75.7
Zm00001d022172_P001	Maize	golgi, peroxisome	83.74	72.34
GSMUA_Achr11P...	Banana	endoplasmic reticulum	70.94	70.94
GSMUA_Achr5P00190_001	Banana	extracellular	70.94	70.94
CDY00519	Canola	cytosol	70.44	69.42
CDY31913	Canola	cytosol	70.44	69.42
Bra028298.1-P	Field mustard	cytosol	68.47	69.15
AT5G52210.2	Thale cress	cytosol	68.47	67.8
CDY38908	Canola	cytosol	67.98	67.32
VIT_00s0215g00070.t01	Wine grape	endoplasmic reticulum	67.49	66.83
Bra029132.1-P	Field mustard	cytosol	66.01	66.67
Solyc10g074630.1.1	Tomato	cytosol	63.05	66.32
KRH11380	Soybean	endoplasmic reticulum	66.5	66.18
KRH20906	Soybean	endoplasmic reticulum	66.01	65.69
VIT_19s0027g00160.t01	Wine grape	cytosol, extracellular	40.39	62.6
CDY32591	Canola	cytosol	67.98	54.55
VIT_00s0189g00080.t01	Wine grape	cytosol	39.9	54.36
PGSC0003DMT400043326	Potato	cytosol	58.13	49.79
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	31.53	35.16
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.56	32.61
HORVU1Hr1G051350.1	Barley	cytosol	30.54	32.46
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	30.54	30.69
HORVU5Hr1G111500.2	Barley	mitochondrion	32.02	27.78
HORVU1Hr1G068790.1	Barley	plastid	31.53	27.12
HORVU5Hr1G004340.2	Barley	cytosol, plastid	31.03	26.47
HORVU2Hr1G054780.5	Barley	cytosol	21.67	25.73
HORVU5Hr1G045440.2	Barley	cytosol, plastid	31.53	25.4
HORVU0Hr1G027130.1	Barley	plasma membrane	31.53	25.2
HORVU5Hr1G002120.6	Barley	cytosol, plastid	31.03	24.8
HORVU6Hr1G067840.2	Barley	cytosol	29.56	21.51
HORVU3Hr1G079700.1	Barley	cytosol	31.53	20.58

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EMBL:AK361000	UniProt:F2DAT6	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G014610	EnsemblPlants:HORVU1Hr1G014610.1
InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF218	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002006201	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DAT6]

Coordinates

chrchr1H:-:40513042..40542911

Molecular Weight (calculated)

23046.6 Da

IEP (calculated)

6.239

GRAVY (calculated)

-0.271

Length

203 amino acids

Sequence
(BLAST)

001: MFSLFHGLWN HVFSKTEFRV LILGVHKSGK TTLLEKLKSI YLKGEGLPHD HIGPTVGLNI GRIEDANVKL VFWDLGGQPG LRTIWEKYYD EAHAIVYVID
101: SASASTFEDA KSALEKVLRH EDLQEAPLLV FANKQDLPAA VTEEELDRHL HLKEFDERPY MFVAGSAYDG TGIKLGIDWL VEEMGKSRRT EALRTRTDTY
201: AKF

Best Arabidopsis Sequence Match ( AT5G52210.2 )
(BLAST)

001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS

Arabidopsis Description

ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.