Factsheet for TraesCS2D01G172000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G069400.1	Wheat	peroxisome	91.96	90.15
TraesCS1D01G072000.1	Wheat	peroxisome	91.46	89.66
HORVU1Hr1G014610.1	Barley	cytosol	90.45	88.67
EER99714	Sorghum	cytosol	80.4	78.82
Os07t0620400-01	Rice	cytosol	77.89	76.35
TraesCS2B01G191100.2	Wheat	cytosol, plastid	75.38	70.09
Zm00001d022172_P001	Maize	golgi, peroxisome	79.9	67.66
GSMUA_Achr11P...	Banana	endoplasmic reticulum	65.83	64.53
GSMUA_Achr5P00190_001	Banana	extracellular	65.83	64.53
CDY00519	Canola	cytosol	65.83	63.59
CDY31913	Canola	cytosol	65.83	63.59
Bra028298.1-P	Field mustard	cytosol	63.82	63.18
AT5G52210.2	Thale cress	cytosol	63.82	61.95
CDY38908	Canola	cytosol	63.32	61.46
KRH11380	Soybean	endoplasmic reticulum	62.81	61.27
VIT_00s0215g00070.t01	Wine grape	endoplasmic reticulum	62.81	60.98
KRH20906	Soybean	endoplasmic reticulum	62.31	60.78
Bra029132.1-P	Field mustard	cytosol	61.31	60.7
Solyc10g074630.1.1	Tomato	cytosol	57.79	59.59
VIT_19s0027g00160.t01	Wine grape	cytosol, extracellular	38.19	58.02
VIT_00s0189g00080.t01	Wine grape	cytosol	37.69	50.34
CDY32591	Canola	cytosol	63.32	49.8
PGSC0003DMT400043326	Potato	cytosol	53.77	45.15
TraesCS5D01G150000.1	Wheat	cytosol	30.15	32.79
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	29.65	32.6
TraesCS5D01G020800.1	Wheat	cytosol	29.65	31.89
TraesCS1D01G429700.1	Wheat	cytosol	29.15	31.35
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	30.15	30.3
TraesCS4D01G152600.1	Wheat	cytosol	27.64	29.89
TraesCS1D01G201300.1	Wheat	cytosol	28.64	29.84
TraesCS5D01G480200.1	Wheat	unclear	30.15	28.44
TraesCS6D01G246900.1	Wheat	cytosol	27.14	28.27
TraesCS3D01G330500.1	Wheat	cytosol	30.15	23.9
TraesCS1D01G305900.1	Wheat	golgi	30.15	22.81
TraesCS4D01G018600.1	Wheat	cytosol	16.58	22.6

Protein Annotations

EnsemblPlants:TraesCS2D01G172000.1	EnsemblPlantsGene:TraesCS2D01G172000	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	PANTHER:PTHR11711	PANTHER:PTHR11711:SF218	PFAM:PF00025	PFscan:PS51417
PRINTS:PR00328	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr2D:+:115947943..115950782

Molecular Weight (calculated)

22506.3 Da

IEP (calculated)

7.667

GRAVY (calculated)

-0.260

Length

199 amino acids

Sequence
(BLAST)

001: MFSLLHGLWN HVFNKKEFCV LILGVHKDGK TPLLEKLKSI NLKGQGLPHD RIGPTVGLNI GCIEDANVKL VFWDLGRQPG LRTIWEKYSH AIVYVIDSSS
101: STFEDAKSAL EKVLRHEDLQ EAPLLVFANK QDLPAAVREE ELDRHLHLKE FDERPCMFVA GSAYDGTGIK LGIDWLVEEM GKGRRTKALR ARTDTYAKI

Best Arabidopsis Sequence Match ( AT5G52210.2 )
(BLAST)

001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS

Arabidopsis Description

ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.