Factsheet for Bra029132.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38908	Canola	cytosol	100.0	98.05
Bra028298.1-P	Field mustard	cytosol	95.02	95.02
AT5G52210.2	Thale cress	cytosol	94.03	92.2
Solyc10g074630.1.1	Tomato	cytosol	77.11	80.31
CDY32591	Canola	cytosol	100.0	79.45
VIT_00s0215g00070.t01	Wine grape	endoplasmic reticulum	77.61	76.1
KRH11380	Soybean	endoplasmic reticulum	77.11	75.98
KRH20906	Soybean	endoplasmic reticulum	76.12	75.0
GSMUA_Achr11P...	Banana	endoplasmic reticulum	75.62	74.88
GSMUA_Achr5P00190_001	Banana	extracellular	74.63	73.89
Os03t0392300-01	Rice	cytosol	70.15	69.46
EER99714	Sorghum	cytosol	69.65	68.97
Os07t0620400-01	Rice	cytosol	68.66	67.98
TraesCS1A01G069400.1	Wheat	peroxisome	68.66	67.98
TraesCS1B01G087700.1	Wheat	peroxisome	68.16	67.82
VIT_00s0189g00080.t01	Wine grape	cytosol	50.25	67.79
TraesCS1D01G072000.1	Wheat	peroxisome	68.16	67.49
Zm00001d029408_P001	Maize	endoplasmic reticulum	66.67	66.34
HORVU1Hr1G014610.1	Barley	cytosol	66.67	66.01
EER94751	Sorghum	cytosol	66.17	65.84
VIT_19s0027g00160.t01	Wine grape	cytosol, extracellular	42.79	65.65
TraesCS2D01G172000.1	Wheat	peroxisome	60.7	61.31
PGSC0003DMT400043326	Potato	cytosol	70.15	59.49
Zm00001d022172_P001	Maize	golgi, peroxisome	69.15	59.15
TraesCS2B01G191100.2	Wheat	cytosol, plastid	59.2	55.61
Bra003954.1-P	Field mustard	cytosol	31.34	34.81
Bra011295.1-P	Field mustard	cytosol	31.34	34.62
Bra024604.1-P	Field mustard	mitochondrion	30.35	33.7
Bra004475.1-P	Field mustard	cytosol	30.35	33.7
Bra014403.1-P	Field mustard	cytosol	30.35	33.7
Bra016215.1-P	Field mustard	cytosol	30.35	33.7
Bra016344.1-P	Field mustard	mitochondrion	30.35	33.7
Bra021387.1-P	Field mustard	cytosol	30.35	33.7
Bra027153.1-P	Field mustard	cytosol	30.35	33.7
Bra007833.1-P	Field mustard	cytosol	30.35	33.52
Bra032062.1-P	Field mustard	cytosol	30.35	33.52
Bra012376.1-P	Field mustard	cytosol	31.34	33.51
Bra039613.1-P	Field mustard	cytosol	30.35	32.97
Bra024470.1-P	Field mustard	cytosol	29.85	32.43
Bra008746.1-P	Field mustard	mitochondrion	30.35	32.28
Bra039725.1-P	Field mustard	cytosol	29.35	32.24
Bra000443.1-P	Field mustard	cytosol	30.35	31.77
Bra036878.1-P	Field mustard	cytosol	28.86	31.69
Bra008579.1-P	Field mustard	cytosol	29.35	30.73
Bra021371.1-P	Field mustard	cytosol	28.86	30.21
Bra032015.1-P	Field mustard	cytosol	28.36	29.69
Bra007917.1-P	Field mustard	cytosol	21.89	29.33
Bra036410.1-P	Field mustard	mitochondrion	27.36	13.1

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra029132	EnsemblPlants:Bra029132.1	EnsemblPlants:Bra029132.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4EK15	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF218	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002540079	:	:

Description

AT5G52210 (E=3e-107) ATARLB1, ATGB1 | ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1); GTP binding

Coordinates

chrA03:-:6500680..6501707

Molecular Weight (calculated)

22777.4 Da

IEP (calculated)

6.368

GRAVY (calculated)

-0.241

Length

201 amino acids

Sequence
(BLAST)

001: MHGLWSYMFS KTEFHVLILG IDKAGKTTFL EKLKTIYSIS EGLPHDRIVP TVGLNIGRIE VSNAKIVFWD LGGQPGLRSI WEKYYEEAHA LIYLIDAACP
101: SRFEESKSAL EKALRHEDLQ GAPLLILANK QDLSNAVSAE ELDRYLDLKK LDERVYMFEP VSGYDGRGIK ESVEWLVGVM ERSKRTETLR ARTGYVPVPS
201: S

Best Arabidopsis Sequence Match ( AT5G52210.2 )
(BLAST)

001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS

Arabidopsis Description

ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.