Factsheet for Bra024604.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
mitochondrion 5
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G70490.4	Thale cress	mitochondrion, peroxisome	99.45	99.45
CDY03747	Canola	mitochondrion, peroxisome	99.45	99.45
CDY04706	Canola	mitochondrion, peroxisome	99.45	99.45
CDY44152	Canola	mitochondrion, peroxisome	99.45	99.45
Bra016344.1-P	Field mustard	mitochondrion	98.89	98.89
PGSC0003DMT400003226	Potato	mitochondrion	97.79	97.79
Bra004475.1-P	Field mustard	cytosol	97.79	97.79
TraesCS2A01G235500.1	Wheat	golgi, plastid	97.24	97.24
Bra014403.1-P	Field mustard	cytosol	97.24	97.24
GSMUA_Achr2P11590_001	Banana	mitochondrion	97.24	97.24
Bra027153.1-P	Field mustard	cytosol	97.24	97.24
Os03t0811900-01	Rice	plasma membrane	96.69	96.69
VIT_14s0066g01080.t01	Wine grape	mitochondrion	96.69	96.69
EER96075	Sorghum	mitochondrion	96.69	96.69
Bra021387.1-P	Field mustard	cytosol	96.69	96.69
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	96.69	96.69
Bra016215.1-P	Field mustard	cytosol	96.69	96.69
Os07t0223100-01	Rice	plasma membrane	96.69	96.69
Os07t0223400-01	Rice	mitochondrion	96.69	96.69
EER93218	Sorghum	mitochondrion	96.13	96.13
Bra012376.1-P	Field mustard	cytosol	98.89	95.21
GSMUA_Achr7P18350_001	Banana	cytosol	86.19	93.98
Zm00001d023657_P001	Maize	cytosol	24.31	93.62
Zm00001d005231_P006	Maize	cytosol	96.13	93.55
KRH36902	Soybean	endoplasmic reticulum	95.03	93.48
GSMUA_Achr10P...	Banana	cytosol	85.64	93.37
Bra008746.1-P	Field mustard	mitochondrion	97.24	93.12
Bra003954.1-P	Field mustard	cytosol	91.71	91.71
Bra000443.1-P	Field mustard	cytosol	96.13	90.62
Bra007917.1-P	Field mustard	cytosol	72.93	88.0
Zm00001d019191_P007	Maize	peroxisome	96.69	87.94
GSMUA_Achr11P...	Banana	cytosol	96.69	87.5
Zm00001d013007_P001	Maize	plastid	96.13	85.71
TraesCS5A01G467400.1	Wheat	cytosol	96.13	82.46
TraesCS5D01G480200.1	Wheat	unclear	96.13	82.46
TraesCS5B01G479100.1	Wheat	golgi	96.13	82.46
HORVU5Hr1G111500.2	Barley	mitochondrion	96.13	74.36
GSMUA_Achr3P18390_001	Banana	plasma membrane	97.24	72.73
Zm00001d012537_P003	Maize	cytosol	75.69	67.49
Bra011295.1-P	Field mustard	cytosol	60.22	59.89
Bra032062.1-P	Field mustard	cytosol	59.67	59.34
Bra007833.1-P	Field mustard	cytosol	59.67	59.34
Bra008579.1-P	Field mustard	cytosol	59.12	55.73
Bra021371.1-P	Field mustard	cytosol	58.56	55.21
Bra032015.1-P	Field mustard	cytosol	58.56	55.21
GSMUA_Achr6P08570_001	Banana	cytosol	97.79	55.14
Bra039725.1-P	Field mustard	cytosol	52.49	51.91
Bra036878.1-P	Field mustard	cytosol	51.93	51.37
Bra039613.1-P	Field mustard	cytosol	46.96	45.95
Bra024470.1-P	Field mustard	cytosol	45.86	44.86
Bra028298.1-P	Field mustard	cytosol	33.7	30.35
Bra029132.1-P	Field mustard	cytosol	33.7	30.35
Bra036410.1-P	Field mustard	mitochondrion	63.54	27.38

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra024604	EnsemblPlants:Bra024604.1	EnsemblPlants:Bra024604.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005794	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0046686	InterPro:IPR024156
UniProt:M4E749	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002542983	:	:	:

Description

AT1G70490 (E=4e-101) ATARFA1D, ARFA1D | ARFA1D; GTP binding / phospholipase activator/ protein binding

Coordinates

chrA09:-:24096366..24097370

Molecular Weight (calculated)

20551.7 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.217

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMGGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK A

Best Arabidopsis Sequence Match ( AT1G70490.5 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK A

Arabidopsis Description

ARF2-AADP-ribosylation factor 2-B [Source:UniProtKB/Swiss-Prot;Acc:P0DH91]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.