Factsheet for Bra012376.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 4
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024604.1-P	Field mustard	mitochondrion	95.21	98.89
Bra016344.1-P	Field mustard	mitochondrion	95.21	98.89
Bra004475.1-P	Field mustard	cytosol	94.15	97.79
PGSC0003DMT400003226	Potato	mitochondrion	94.15	97.79
Bra021387.1-P	Field mustard	cytosol	94.15	97.79
GSMUA_Achr2P11590_001	Banana	mitochondrion	93.62	97.24
Bra027153.1-P	Field mustard	cytosol	93.62	97.24
TraesCS2A01G235500.1	Wheat	golgi, plastid	93.62	97.24
Bra014403.1-P	Field mustard	cytosol	93.62	97.24
Bra016215.1-P	Field mustard	cytosol	93.62	97.24
EER93218	Sorghum	mitochondrion	93.09	96.69
EER96075	Sorghum	mitochondrion	93.09	96.69
Os03t0811900-01	Rice	plasma membrane	93.09	96.69
Os07t0223100-01	Rice	plasma membrane	93.09	96.69
Os07t0223400-01	Rice	mitochondrion	93.09	96.69
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	93.09	96.69
VIT_14s0066g01080.t01	Wine grape	mitochondrion	93.09	96.69
Zm00001d005231_P006	Maize	cytosol	93.62	94.62
GSMUA_Achr7P18350_001	Banana	cytosol	83.51	94.58
GSMUA_Achr10P...	Banana	cytosol	82.98	93.98
Zm00001d023657_P001	Maize	cytosol	23.4	93.62
KRH36902	Soybean	endoplasmic reticulum	91.49	93.48
Bra008746.1-P	Field mustard	mitochondrion	93.62	93.12
Bra003954.1-P	Field mustard	cytosol	88.3	91.71
Bra000443.1-P	Field mustard	cytosol	93.62	91.67
GSMUA_Achr11P...	Banana	cytosol	94.15	88.5
Zm00001d019191_P007	Maize	peroxisome	93.09	87.94
Bra007917.1-P	Field mustard	cytosol	69.68	87.33
Zm00001d013007_P001	Maize	plastid	93.09	86.21
TraesCS5A01G467400.1	Wheat	cytosol	93.09	82.94
TraesCS5B01G479100.1	Wheat	golgi	93.09	82.94
TraesCS5D01G480200.1	Wheat	unclear	93.09	82.94
HORVU5Hr1G111500.2	Barley	mitochondrion	93.09	74.79
GSMUA_Achr3P18390_001	Banana	plasma membrane	94.68	73.55
Zm00001d012537_P003	Maize	cytosol	73.4	67.98
Bra011295.1-P	Field mustard	cytosol	57.98	59.89
Bra007833.1-P	Field mustard	cytosol	57.45	59.34
Bra032062.1-P	Field mustard	cytosol	57.45	59.34
Bra008579.1-P	Field mustard	cytosol	56.91	55.73
GSMUA_Achr6P08570_001	Banana	cytosol	94.68	55.45
Bra021371.1-P	Field mustard	cytosol	56.38	55.21
Bra032015.1-P	Field mustard	cytosol	56.38	55.21
Bra036878.1-P	Field mustard	cytosol	50.53	51.91
Bra039725.1-P	Field mustard	cytosol	50.53	51.91
Bra039613.1-P	Field mustard	cytosol	45.74	46.49
Bra024470.1-P	Field mustard	cytosol	44.68	45.41
Bra028298.1-P	Field mustard	cytosol	33.51	31.34
Bra029132.1-P	Field mustard	cytosol	33.51	31.34
Bra036410.1-P	Field mustard	mitochondrion	62.23	27.86

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra012376	EnsemblPlants:Bra012376.1	EnsemblPlants:Bra012376.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4D7B6	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00025413AC	:	:

Description

AT1G70490 (E=2e-101) ATARFA1D, ARFA1D | ARFA1D; GTP binding / phospholipase activator/ protein binding

Coordinates

chrA07:-:8121156..8122145

Molecular Weight (calculated)

21445.8 Da

IEP (calculated)

6.961

GRAVY (calculated)

-0.256

Length

188 amino acids

Sequence
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK VENVPNRN

Best Arabidopsis Sequence Match ( AT1G70490.5 )
(BLAST)

Arabidopsis Description

ARF2-AADP-ribosylation factor 2-B [Source:UniProtKB/Swiss-Prot;Acc:P0DH91]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.