CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
mitochondrion 5
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0223100-01	Rice	plasma membrane	100.0	100.0
Os07t0223400-01	Rice	mitochondrion	100.0	100.0
TraesCS2A01G235500.1	Wheat	golgi, plastid	99.45	99.45
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	98.89	98.89
AT2G47170.2	Thale cress	mitochondrion	98.34	98.34
EER93218	Sorghum	mitochondrion	98.34	98.34
KRG93262	Soybean	nucleus	97.79	97.79
KRH56584	Soybean	mitochondrion	97.79	97.79
AT1G10630.2	Thale cress	mitochondrion	97.79	97.79
Bra016344.1-P	Field mustard	mitochondrion	97.79	97.79
CDX91717	Canola	mitochondrion	97.79	97.79
CDY41444	Canola	mitochondrion	97.79	97.79
AT1G23490.1	Thale cress	mitochondrion, peroxisome	97.24	97.24
PGSC0003DMT400003226	Potato	mitochondrion	97.24	97.24
CDY54291	Canola	mitochondrion, peroxisome	97.24	97.24
CDY44152	Canola	mitochondrion, peroxisome	97.24	97.24
CDY25787	Canola	mitochondrion, peroxisome	97.24	97.24
CDY11588	Canola	mitochondrion, peroxisome	97.24	97.24
CDY09441	Canola	mitochondrion, peroxisome	97.24	97.24
CDY04706	Canola	mitochondrion, peroxisome	97.24	97.24
CDY03747	Canola	mitochondrion, peroxisome	97.24	97.24
AT1G70490.4	Thale cress	mitochondrion, peroxisome	97.24	97.24
CDY47137	Canola	peroxisome	96.69	96.69
Bra024604.1-P	Field mustard	mitochondrion	96.69	96.69
EES19719	Sorghum	mitochondrion	96.69	96.69
VIT_14s0066g01080.t01	Wine grape	mitochondrion	96.13	96.13
GSMUA_Achr7P18350_001	Banana	cytosol	87.29	95.18
Bra012376.1-P	Field mustard	cytosol	96.69	93.09
KRH36902	Soybean	endoplasmic reticulum	93.92	92.39
Zm00001d019191_P007	Maize	peroxisome	100.0	90.95
Bra003954.1-P	Field mustard	cytosol	90.06	90.06
CDX68343	Canola	cytosol	90.06	89.56
CDY23500	Canola	cytosol	89.5	75.7
OQU87737	Sorghum	cytosol	96.69	66.04
EES14799	Sorghum	cytosol, mitochondrion	60.77	60.44
OQU85607	Sorghum	cytosol, mitochondrion	59.12	59.78
OQU86657	Sorghum	peroxisome, plastid	98.34	57.98
EER94416	Sorghum	cytosol	60.22	56.19
EES07411	Sorghum	cytosol	59.12	55.15
EES08754	Sorghum	cytosol, mitochondrion	53.04	52.17
EES06219	Sorghum	mitochondrion	55.25	51.55
EER89435	Sorghum	cytosol	51.93	49.74
KXG37868	Sorghum	cytosol	50.28	49.19
EER94751	Sorghum	cytosol	35.36	31.68
EER99714	Sorghum	cytosol	35.36	31.53

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EntrezGene:8069106	UniProt:C5XDD0	ncoils:Coil	EnsemblPlants:EER96075
ProteinID:EER96075	ProteinID:EER96075.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328
PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF215	SMART:SM00175	SMART:SM00177	SMART:SM00178
EnsemblPlantsGene:SORBI_3002G078400	SUPFAM:SSF52540	unigene:Sbi.3659	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI00000AC72C	RefSeq:XP_002459554.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:8147902..8151657

Molecular Weight (calculated)

20580.8 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.176

Length

181 amino acids

Sequence
(BLAST)

001: MGLAFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TTGEGLYEGL DWLSSNIASK A

Best Arabidopsis Sequence Match ( AT2G47170.3 )
(BLAST)

001: MGLSFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ARF1ADP-ribosylation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P36397]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.