Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029408_P001 | Maize | endoplasmic reticulum | 96.04 | 96.04 |
| Os03t0392300-01 | Rice | cytosol | 84.16 | 83.74 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 77.23 | 76.85 |
| EER99714 | Sorghum | cytosol | 76.73 | 76.35 |
| GSMUA_Achr5P00190_001 | Banana | extracellular | 74.75 | 74.38 |
| Solyc10g074630.1.1 | Tomato | cytosol | 65.84 | 68.91 |
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 69.8 | 68.78 |
| KRH11380 | Soybean | endoplasmic reticulum | 69.31 | 68.63 |
| CDY31913 | Canola | cytosol | 69.8 | 68.45 |
| AT5G52210.2 | Thale cress | cytosol | 69.31 | 68.29 |
| KRH20906 | Soybean | endoplasmic reticulum | 68.81 | 68.14 |
| CDY00519 | Canola | cytosol | 69.31 | 67.96 |
| Bra028298.1-P | Field mustard | cytosol | 67.33 | 67.66 |
| CDY38908 | Canola | cytosol | 67.82 | 66.83 |
| Bra029132.1-P | Field mustard | cytosol | 65.84 | 66.17 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 40.59 | 62.6 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 42.57 | 57.72 |
| CDY32591 | Canola | cytosol | 67.82 | 54.15 |
| PGSC0003DMT400043326 | Potato | cytosol | 61.88 | 52.74 |
| EES14799 | Sorghum | cytosol, mitochondrion | 32.18 | 35.71 |
| EER96075 | Sorghum | mitochondrion | 31.68 | 35.36 |
| EES19719 | Sorghum | mitochondrion | 31.19 | 34.81 |
| EER93218 | Sorghum | mitochondrion | 31.19 | 34.81 |
| KXG37868 | Sorghum | cytosol | 30.69 | 33.51 |
| OQU85607 | Sorghum | cytosol, mitochondrion | 29.21 | 32.96 |
| EES08754 | Sorghum | cytosol, mitochondrion | 29.21 | 32.07 |
| EES07411 | Sorghum | cytosol | 29.7 | 30.93 |
| EER94416 | Sorghum | cytosol | 29.7 | 30.93 |
| EES06219 | Sorghum | mitochondrion | 29.7 | 30.93 |
| EER89435 | Sorghum | cytosol | 25.74 | 27.51 |
| OQU87737 | Sorghum | cytosol | 30.69 | 23.4 |
| OQU86657 | Sorghum | peroxisome, plastid | 31.68 | 20.85 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:8080454 | UniProt:C5WXP0 | EnsemblPlants:EER94751 | ProteinID:EER94751 |
| ProteinID:EER94751.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
| GO:GO:0009987 | InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 |
| PANTHER:PTHR11711 | PANTHER:PTHR11711:SF218 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 | EnsemblPlantsGene:SORBI_3001G349500 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI0001A832E9 |
| RefSeq:XP_002467753.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:63901440..63905290
Molecular Weight (calculated)
22758.4 Da
IEP (calculated)
6.040
GRAVY (calculated)
-0.218
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSLFYGLWK YVFTKDEFRV LILGVDKAGK TTLLEKLKSM YLKGEGLPPD RVVPTVGLNI GRIEDAKAKL VFWDLGGQVG LRTIWEKYYE EAHAIMYVID
101: AATASSFEDS KSALEKVIHH EHLRGAPLLI VANKQDLPGA IDDEELAKFL HQELDERPYT FQAVSAYDGR GIKSGIDWLV EQMEKSKRTE TLQARAGVPG
201: QI
101: AATASSFEDS KSALEKVIHH EHLRGAPLLI VANKQDLPGA IDDEELAKFL HQELDERPYT FQAVSAYDGR GIKSGIDWLV EQMEKSKRTE TLQARAGVPG
201: QI
001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
Arabidopsis Description
ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.