Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- mitochondrion 1
- endoplasmic reticulum 5
- cytosol 1
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g074630.1.1 | Tomato | cytosol | 77.56 | 82.38 |
| GSMUA_Achr5P00190_001 | Banana | extracellular | 81.46 | 82.27 |
| KRH11380 | Soybean | endoplasmic reticulum | 81.46 | 81.86 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 52.2 | 81.68 |
| KRH20906 | Soybean | endoplasmic reticulum | 80.0 | 80.39 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 79.51 | 80.3 |
| CDY38908 | Canola | cytosol | 78.05 | 78.05 |
| AT5G52210.2 | Thale cress | cytosol | 78.05 | 78.05 |
| CDY31913 | Canola | cytosol | 78.05 | 77.67 |
| Bra029132.1-P | Field mustard | cytosol | 76.1 | 77.61 |
| CDY00519 | Canola | cytosol | 77.56 | 77.18 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 56.1 | 77.18 |
| Bra028298.1-P | Field mustard | cytosol | 75.61 | 77.11 |
| VIT_00s2604g00010.t01 | Wine grape | extracellular | 37.56 | 77.0 |
| Os03t0392300-01 | Rice | cytosol | 71.22 | 71.92 |
| EER99714 | Sorghum | cytosol | 70.73 | 71.43 |
| Os07t0620400-01 | Rice | cytosol | 70.24 | 70.94 |
| Zm00001d029408_P001 | Maize | endoplasmic reticulum | 68.78 | 69.8 |
| EER94751 | Sorghum | cytosol | 68.78 | 69.8 |
| TraesCS1A01G069400.1 | Wheat | peroxisome | 67.32 | 67.98 |
| TraesCS1B01G087700.1 | Wheat | peroxisome | 66.83 | 67.82 |
| TraesCS1D01G072000.1 | Wheat | peroxisome | 66.83 | 67.49 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 66.83 | 67.49 |
| CDY32591 | Canola | cytosol | 78.05 | 63.24 |
| TraesCS2D01G172000.1 | Wheat | peroxisome | 60.98 | 62.81 |
| PGSC0003DMT400043326 | Potato | cytosol | 72.2 | 62.45 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 71.22 | 62.13 |
| TraesCS2B01G191100.2 | Wheat | cytosol, plastid | 57.56 | 55.14 |
| VIT_04s0023g01820.t01 | Wine grape | cytosol | 32.68 | 36.22 |
| VIT_04s0008g07360.t01 | Wine grape | cytosol, mitochondrion | 31.22 | 35.36 |
| VIT_05s0020g00490.t01 | Wine grape | cytosol | 31.71 | 35.14 |
| VIT_05s0020g04460.t01 | Wine grape | cytosol | 20.49 | 35.0 |
| VIT_14s0066g01080.t01 | Wine grape | mitochondrion | 30.73 | 34.81 |
| VIT_01s0127g00440.t01 | Wine grape | cytosol, mitochondrion | 32.2 | 33.67 |
| VIT_16s0039g02240.t01 | Wine grape | cytosol | 28.78 | 30.57 |
| VIT_07s0129g01090.t01 | Wine grape | mitochondrion | 29.27 | 30.3 |
| VIT_11s0052g01720.t01 | Wine grape | cytosol, mitochondrion | 31.71 | 29.28 |
| VIT_07s0005g02000.t01 | Wine grape | cytosol | 31.71 | 23.72 |
| VIT_14s0060g00690.t01 | Wine grape | golgi | 31.71 | 18.9 |
Protein Annotations
| EntrezGene:100243509 | wikigene:100243509 | Gene3D:3.40.50.300 | MapMan:35.1 | ProteinID:CBI33044 | ProteinID:CBI33044.3 |
| UniProt:D7TRC1 | EMBL:FN596016 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR024156 | EntrezGene:LOC100243509 | wikigene:LOC100243509 | InterPro:P-loop_NTPase |
| PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF218 | SMART:SM00175 |
| SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR |
| TIGR:TC70461 | TIGRFAMs:TIGR00231 | UniParc:UPI0001BE3C22 | ArrayExpress:VIT_00s0215g00070 | EnsemblPlantsGene:VIT_00s0215g00070 | EnsemblPlants:VIT_00s0215g00070.t01 |
| unigene:Vvi.17528 | RefSeq:XP_002265687 | RefSeq:XP_002265687.2 | RefSeq:XP_019073686.1 | RefSeq:XP_019073687.1 | RefSeq:XP_019073688.1 |
Description
No Description!
Coordinates
chrUn:+:13555516..13561370
Molecular Weight (calculated)
23087.0 Da
IEP (calculated)
5.796
GRAVY (calculated)
-0.080
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSLFYGLWK YLFSKAEFHV LILGINKAGK TTLLEKLKAL YSNLEGLPPD RILPTVGLNI GRVELSNTKL VFWDLGGQPG LRSIWEKYYE EAHAVVYVID
101: ASCPSRFEDS KSALEKILRH EDLQGAPLLI LANKQDLGDA ASSEEIARYL DLKKLDERVY MVEAVSAYDG MGIKESVDWL VEVMERSKRT EMLRVRAAVT
201: SPATA
101: ASCPSRFEDS KSALEKILRH EDLQGAPLLI LANKQDLGDA ASSEEIARYL DLKKLDERVY MVEAVSAYDG MGIKESVDWL VEVMERSKRT EMLRVRAAVT
201: SPATA
001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
Arabidopsis Description
ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.