Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 4
- endoplasmic reticulum 1
- golgi 1
- plastid 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_04s0210g00200.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G24765.1 | VIT_04s0210g00200.t01 | AT5G66030.1 | 16236155 |
| AT2G24765.1 | VIT_04s0210g00200.t01 | AT5G66030.1 | 16830178 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007833.1-P | Field mustard | cytosol | 93.37 | 92.86 |
| Bra032062.1-P | Field mustard | cytosol | 93.37 | 92.86 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 93.37 | 92.86 |
| CDY45596 | Canola | cytosol | 93.37 | 92.86 |
| CDX76793 | Canola | cytosol | 93.37 | 92.86 |
| CDY34756 | Canola | cytosol | 93.37 | 92.86 |
| AT2G24765.1 | Thale cress | cytosol | 92.82 | 92.31 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 92.82 | 92.31 |
| CDX75192 | Canola | cytosol | 91.71 | 91.21 |
| CDX68781 | Canola | cytosol | 91.71 | 91.21 |
| Bra011295.1-P | Field mustard | cytosol | 91.71 | 91.21 |
| EES14799 | Sorghum | cytosol, mitochondrion | 91.16 | 90.66 |
| Os08t0248900-01 | Rice | nucleus, plasma membrane | 90.61 | 90.11 |
| CDY36172 | Canola | cytosol | 90.06 | 89.56 |
| HORVU7Hr1G061220.1 | Barley | cytosol, mitochondrion | 90.06 | 89.56 |
| TraesCS7D01G282400.1 | Wheat | cytosol, mitochondrion | 90.61 | 82.83 |
| TraesCS7B01G181400.1 | Wheat | cytosol, mitochondrion | 90.61 | 82.83 |
| TraesCS7A01G284000.3 | Wheat | cytosol, mitochondrion | 90.06 | 82.32 |
| VIT_11s0052g01720.t01 | Wine grape | cytosol, mitochondrion | 92.27 | 75.23 |
| VIT_14s0066g01080.t01 | Wine grape | mitochondrion | 59.67 | 59.67 |
| VIT_05s0020g00490.t01 | Wine grape | cytosol | 60.77 | 59.46 |
| VIT_01s0127g00440.t01 | Wine grape | cytosol, mitochondrion | 60.77 | 56.12 |
| VIT_16s0039g02240.t01 | Wine grape | cytosol | 56.91 | 53.37 |
| VIT_07s0129g01090.t01 | Wine grape | mitochondrion | 51.38 | 46.97 |
| VIT_05s0020g04460.t01 | Wine grape | cytosol | 29.28 | 44.17 |
| VIT_04s0023g01820.t01 | Wine grape | cytosol | 43.65 | 42.7 |
| VIT_07s0005g02000.t01 | Wine grape | cytosol | 60.77 | 40.15 |
| VIT_14s0060g00690.t01 | Wine grape | golgi | 60.77 | 31.98 |
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 35.36 | 31.22 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 22.1 | 30.53 |
| VIT_00s2604g00010.t01 | Wine grape | extracellular | 16.57 | 30.0 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 19.89 | 24.16 |
Protein Annotations
| EntrezGene:100241677 | wikigene:100241677 | EntrezGene:100249651 | wikigene:100249651 | MapMan:22.3.2.1 | Gene3D:3.40.50.300 |
| ProteinID:CBI21188 | ProteinID:CBI21188.3 | UniProt:D7SV89 | EMBL:FN595231 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005795 | GO:GO:0005886 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0046686 | InterPro:IPR024156 | EntrezGene:LOC100241677 |
| wikigene:LOC100241677 | EntrezGene:LOC100249651 | wikigene:LOC100249651 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 |
| PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF41 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGR:TC52077 | TIGRFAMs:TIGR00231 | UniParc:UPI0001983045 |
| ArrayExpress:VIT_04s0008g07360 | EnsemblPlantsGene:VIT_04s0008g07360 | EnsemblPlants:VIT_04s0008g07360.t01 | unigene:Vvi.12213 | RefSeq:XP_002263625 | RefSeq:XP_002263625.1 |
| RefSeq:XP_002277581 | RefSeq:XP_002277581.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4:-:7704661..7722915
Molecular Weight (calculated)
20351.6 Da
IEP (calculated)
5.012
GRAVY (calculated)
0.035
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MGILFTRMFS SVFGNREARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAIIY VVDSSDTDRI
101: VIAKDEFHAI LEEEELKGAI VLIFANKQDL PGALDDAALT EALELHKIKN RQWAIFKTCA IKGEGLYEGL DWLSNILKSG G
101: VIAKDEFHAI LEEEELKGAI VLIFANKQDL PGALDDAALT EALELHKIKN RQWAIFKTCA IKGEGLYEGL DWLSNILKSG G
001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG
Arabidopsis Description
ARF3ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P40940]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.