Factsheet for GSMUA_Achr11P08190_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 4
mitochondrion 4
endoplasmic reticulum 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24765.1	GSMUA_AchrUn_...	AT5G66030.1	16236155
AT2G24765.1	GSMUA_AchrUn_...	AT5G66030.1	16236155
AT2G24765.1	GSMUA_AchrUn_...	AT5G66030.1	16236155
AT2G24765.1	GSMUA_AchrUn_...	AT5G66030.1	16236155
AT2G24765.1	GSMUA_AchrUn_...	AT5G66030.1	16830178
AT2G24765.1	GSMUA_AchrUn_...	AT5G66030.1	16830178
AT2G24765.1	GSMUA_AchrUn_...	AT5G66030.1	16830178
AT2G24765.1	GSMUA_AchrUn_...	AT5G66030.1	16830178

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	96.7	96.7
KRH02913	Soybean	cytosol	86.26	94.58
EES14799	Sorghum	cytosol, mitochondrion	93.41	93.41
KRH18982	Soybean	endoplasmic reticulum	87.91	93.02
Solyc07g006640.2.1	Tomato	plastid	92.86	92.86
VIT_04s0008g07360.t01	Wine grape	cytosol, mitochondrion	92.31	92.82
Os08t0248900-01	Rice	nucleus, plasma membrane	92.31	92.31
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	91.76	91.76
CDY45596	Canola	cytosol	91.76	91.76
CDY34756	Canola	cytosol	91.76	91.76
CDX76793	Canola	cytosol	91.76	91.76
Bra032062.1-P	Field mustard	cytosol	91.76	91.76
Bra007833.1-P	Field mustard	cytosol	91.76	91.76
AT2G24765.1	Thale cress	cytosol	91.21	91.21
CDX75192	Canola	cytosol	90.66	90.66
CDX68781	Canola	cytosol	90.66	90.66
Bra011295.1-P	Field mustard	cytosol	90.66	90.66
CDY36172	Canola	cytosol	88.46	88.46
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	92.31	84.85
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	92.31	84.85
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	91.76	84.34
VIT_11s0052g01720.t01	Wine grape	cytosol, mitochondrion	91.21	74.77
GSMUA_Achr6P32180_001	Banana	cytosol	47.8	63.97
GSMUA_Achr9P05130_001	Banana	mitochondrion	62.64	62.98
GSMUA_Achr9P17120_001	Banana	cytosol	54.95	62.5
GSMUA_Achr4P10250_001	Banana	mitochondrion	62.09	62.43
GSMUA_Achr2P11590_001	Banana	mitochondrion	61.54	61.88
GSMUA_Achr10P...	Banana	cytosol	54.4	61.88
PGSC0003DMT400070636	Potato	cytosol, mitochondrion	85.71	61.42
GSMUA_Achr5P07760_001	Banana	mitochondrion	60.99	61.33
GSMUA_Achr4P02310_001	Banana	mitochondrion	60.99	61.33
GSMUA_Achr3P09430_001	Banana	cytosol	53.85	61.25
GSMUA_Achr10P...	Banana	cytosol	54.4	59.64
GSMUA_Achr7P18350_001	Banana	cytosol	54.4	59.64
GSMUA_Achr11P...	Banana	cytosol	60.99	55.5
GSMUA_AchrUn_...	Banana	cytosol	54.95	53.76
GSMUA_Achr7P04780_001	Banana	cytosol	55.49	53.72
GSMUA_Achr5P03700_001	Banana	cytosol	56.59	53.09
GSMUA_Achr4P27450_001	Banana	cytosol	54.95	51.55
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	51.1	50.82
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	50.55	50.27
GSMUA_Achr3P18390_001	Banana	plasma membrane	60.99	45.87
GSMUA_Achr9P26270_001	Banana	cytosol	42.31	41.62
GSMUA_Achr6P08570_001	Banana	cytosol	60.99	34.58
GSMUA_Achr5P00190_001	Banana	extracellular	35.16	31.53
GSMUA_Achr11P...	Banana	endoplasmic reticulum	32.42	29.06

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G08190_001	EnsemblPlants:GSMUA_Achr11P08190_001	EnsemblPlants:GSMUA_Achr11T08190_001	InterPro:IPR024156
UniProt:M0RQE9	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF41	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00029666E6	:	:

Description

ADP-ribosylation factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G08190_001]

Coordinates

chr11:+:6344824..6352461

Molecular Weight (calculated)

20322.3 Da

IEP (calculated)

5.012

GRAVY (calculated)

-0.020

Length

182 amino acids

Sequence
(BLAST)

001: MGILFTRLFS SLFGNREARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN VKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRL
101: VTAKDEFHAI LEEEELKSAV VLVFANKQDL PGALDDAAIT EALELHKIKN RQWAIFKTSA IKGEGLFEGL DWLSNTLKSG GG

Best Arabidopsis Sequence Match ( AT2G24765.1 )
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Arabidopsis Description

ARF3ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P40940]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.