Factsheet for GSMUA_Achr4P01270_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	95.63	95.63
KRH34351	Soybean	endoplasmic reticulum	87.98	87.98
KRG92448	Soybean	endoplasmic reticulum	87.43	87.43
KRG92441	Soybean	endoplasmic reticulum	87.43	87.43
Os11t0586900-02	Rice	cytosol	87.43	86.96
TraesCS4D01G152600.1	Wheat	cytosol	85.25	84.78
TraesCS4B01G164400.1	Wheat	endoplasmic reticulum	85.25	84.78
EES08754	Sorghum	cytosol, mitochondrion	85.25	84.78
Solyc03g005300.2.1	Tomato	cytosol	84.7	84.7
TraesCS4A01G149200.1	Wheat	cytosol	84.7	84.24
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.7	84.24
VIT_05s0020g04460.t01	Wine grape	cytosol	55.19	84.17
AT3G22950.1	Thale cress	cytosol	84.15	84.15
PGSC0003DMT400034971	Potato	cytosol	84.15	84.15
Zm00001d052978_P001	Maize	extracellular	84.15	83.7
Bra036878.1-P	Field mustard	cytosol	83.06	83.06
CDY53727	Canola	cytosol	83.06	83.06
Bra039725.1-P	Field mustard	cytosol	83.06	83.06
CDY29751	Canola	cytosol	83.06	83.06
CDY16265	Canola	cytosol	83.06	83.06
KRH34356	Soybean	cytosol, extracellular	62.84	82.73
CDY36874	Canola	cytosol	82.51	82.51
GSMUA_Achr6P32180_001	Banana	cytosol	41.53	55.88
GSMUA_Achr3P09430_001	Banana	cytosol	48.63	55.62
GSMUA_Achr10P...	Banana	cytosol	48.63	55.62
GSMUA_Achr9P17120_001	Banana	cytosol	48.63	55.62
GSMUA_Achr10P...	Banana	cytosol	49.18	54.22
GSMUA_Achr9P05130_001	Banana	mitochondrion	53.55	54.14
GSMUA_Achr7P18350_001	Banana	cytosol	48.63	53.61
GSMUA_Achr5P07760_001	Banana	mitochondrion	53.01	53.59
GSMUA_Achr4P10250_001	Banana	mitochondrion	53.01	53.59
GSMUA_Achr4P02310_001	Banana	mitochondrion	53.01	53.59
GSMUA_Achr2P11590_001	Banana	mitochondrion	52.46	53.04
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	50.82	51.1
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	50.82	51.1
GSMUA_Achr11P...	Banana	cytosol	53.01	48.5
GSMUA_Achr7P04780_001	Banana	cytosol	48.09	46.81
GSMUA_AchrUn_...	Banana	cytosol	46.99	46.24
GSMUA_Achr5P03700_001	Banana	cytosol	48.09	45.36
GSMUA_Achr4P27450_001	Banana	cytosol	48.09	45.36
GSMUA_Achr3P18390_001	Banana	plasma membrane	54.1	40.91
GSMUA_Achr9P26270_001	Banana	cytosol	36.07	35.68
GSMUA_Achr5P00190_001	Banana	extracellular	33.88	30.54
GSMUA_Achr6P08570_001	Banana	cytosol	52.46	29.91
GSMUA_Achr11P...	Banana	endoplasmic reticulum	31.69	28.57

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G01270_001	EnsemblPlants:GSMUA_Achr4P01270_001	EnsemblPlants:GSMUA_Achr4T01270_001	InterPro:IPR024156
UniProt:M0SK44	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF290	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002954531	:	:

Description

ADP-ribosylation factor-like protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr4G01270_001]

Coordinates

chr4:+:1020798..1028598

Molecular Weight (calculated)

20501.7 Da

IEP (calculated)

6.629

GRAVY (calculated)

-0.016

Length

183 amino acids

Sequence
(BLAST)

001: MGALLSRFWF MLFPAKEYKI VVVGLDNAGK TTTLYKLHLG EVVNTSPTIG SNVEEVVYKN IRFEVWDLGG QERLRTSWAT YYRGAHAVIA VIDSTDRARI
101: SIIKDELFRL LQHADLEHTV VLVFANKQDL KDAMSPAEIT EALSLHSIKN HDWHIQACCA LTGEGLYDGL GWIAERVAGK PTT

Best Arabidopsis Sequence Match ( AT3G22950.1 )
(BLAST)

001: MGAFMSRFWF MMFPAKEYKI VVVGLDNAGK TTTLYKLHLG EVVTTHPTVG SNVEELVYKN IRFEVWDLGG QDRLRTSWAT YYRGTHAVIV VIDSTDRARI
101: SFMKDELARL LGHEDLQNSV ILVFANKQDL KDAMTPAEIT DALNLHSIKN HDWHIQASCA VTGEGLYDGL GWIAQKVTGK ATS

Arabidopsis Description

ATARFC1ADP-ribosylation factor C1 [Source:UniProtKB/TrEMBL;Acc:Q9LIK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.