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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • mitochondrion 1
  • cytosol 2
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G152600.1 Wheat cytosol 97.83 97.83
TraesCS4A01G149200.1 Wheat cytosol 97.28 97.28
HORVU4Hr1G038090.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 96.2 96.2
Os11t0586900-02 Rice cytosol 95.11 95.11
EES08754 Sorghum cytosol, mitochondrion 94.02 94.02
Zm00001d052978_P001 Maize extracellular 92.93 92.93
GSMUA_Achr4P01270_001 Banana endoplasmic reticulum 84.78 85.25
GSMUA_Achr1P04710_001 Banana endoplasmic reticulum, extracellular 84.24 84.7
AT3G22950.1 Thale cress cytosol 83.15 83.61
VIT_05s0020g04460.t01 Wine grape cytosol 53.8 82.5
Bra039725.1-P Field mustard cytosol 81.52 81.97
CDY53727 Canola cytosol 81.52 81.97
KRG92448 Soybean endoplasmic reticulum 80.98 81.42
Solyc03g005300.2.1 Tomato cytosol 80.43 80.87
CDY36874 Canola cytosol 80.43 80.87
Bra036878.1-P Field mustard cytosol 80.43 80.87
CDY16265 Canola cytosol 80.43 80.87
CDY29751 Canola cytosol 80.43 80.87
KRG92441 Soybean endoplasmic reticulum 80.43 80.87
KRH34351 Soybean endoplasmic reticulum 80.43 80.87
PGSC0003DMT400034971 Potato cytosol 79.89 80.33
KRH34356 Soybean cytosol, extracellular 57.61 76.26
TraesCS5B01G140900.1 Wheat cytosol 52.72 53.59
TraesCS3B01G368600.1 Wheat mitochondrion 52.17 53.04
TraesCS1B01G317000.1 Wheat mitochondrion 51.63 51.63
TraesCS5B01G479100.1 Wheat golgi 52.17 45.5
TraesCS6B01G114900.2 Wheat mitochondrion 47.83 45.36
TraesCS1B01G212500.1 Wheat cytosol 45.65 43.98
TraesCS7B01G181400.1 Wheat cytosol, mitochondrion 45.65 42.42
TraesCS5B01G013100.1 Wheat cytosol 33.7 33.51
TraesCS1B01G453100.1 Wheat cytosol 20.11 31.36
TraesCS6B01G295200.1 Wheat plastid 41.3 30.89
TraesCS1B01G087700.1 Wheat peroxisome 32.61 29.7
TraesCS2B01G191100.2 Wheat cytosol, plastid 27.72 23.83
Protein Annotations
MapMan:22.3.2.1Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005525
GO:GO:0005575GO:GO:0005622GO:GO:0005623InterPro:IPR024156InterPro:P-loop_NTPasePFAM:PF00025
PRINTS:PR00328PFscan:PS51417PANTHER:PTHR11711PANTHER:PTHR11711:SF290SMART:SM00175SMART:SM00177
SMART:SM00178SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARFInterPro:Small_GTPase_ARF/SARTIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS4B01G164400EnsemblPlants:TraesCS4B01G164400.1TIGR:cd04153:::
Description
No Description!
Coordinates
chr4B:+:340991158..340998939
Molecular Weight (calculated)
20315.3 Da
IEP (calculated)
6.236
GRAVY (calculated)
0.059
Length
184 amino acids
Sequence
(BLAST)
001: MGAWMSRVWF LMFPAKEYKI VVVGLDNAGK TTSLYKLHLG EAVTAAPTIG SNVEEVVFKN IRFEVWDLGG QESLRTSWAT YYSGTHAVIV VIDSTDRARI
101: NIIKDELFRL IQHADLENTV VLVFANKQDL KDAMSAAEIT DALSLHSIKN HDWHIQASCA ITGEGLYDGM GWIAQKVAGK ATAS
Best Arabidopsis Sequence Match ( AT3G22950.1 )
(BLAST)
001: MGAFMSRFWF MMFPAKEYKI VVVGLDNAGK TTTLYKLHLG EVVTTHPTVG SNVEELVYKN IRFEVWDLGG QDRLRTSWAT YYRGTHAVIV VIDSTDRARI
101: SFMKDELARL LGHEDLQNSV ILVFANKQDL KDAMTPAEIT DALNLHSIKN HDWHIQASCA VTGEGLYDGL GWIAQKVTGK ATS
Arabidopsis Description
ATARFC1ADP-ribosylation factor C1 [Source:UniProtKB/TrEMBL;Acc:Q9LIK1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.