Factsheet for TraesCS1B01G317000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G368600.1	Wheat	mitochondrion	97.83	99.45
TraesCS3A01G337300.1	Wheat	mitochondrion	97.83	98.9
KRG99354	Soybean	mitochondrion	97.28	98.89
KRH45651	Soybean	mitochondrion	97.28	98.89
KRH69574	Soybean	endoplasmic reticulum, nucleus	97.28	98.89
Os01t0813400-01	Rice	plasma membrane	97.28	98.89
PGSC0003DMT400035158	Potato	mitochondrion	97.28	98.89
Solyc05g005190.2.1	Tomato	nucleus	97.28	98.89
KRG90489	Soybean	mitochondrion	96.74	98.34
KRG96566	Soybean	mitochondrion	96.74	98.34
PGSC0003DMT400042276	Potato	mitochondrion	96.74	98.34
KRH33780	Soybean	mitochondrion, peroxisome	96.2	97.79
Zm00001d038533_P001	Maize	plastid	97.28	97.28
TraesCS1A01G306200.1	Wheat	mitochondrion	97.83	96.77
VIT_05s0020g00490.t01	Wine grape	cytosol	96.74	96.22
Bra008746.1-P	Field mustard	mitochondrion	96.2	93.65
TraesCS5B01G140900.1	Wheat	cytosol	91.85	93.37
VIT_01s0127g00440.t01	Wine grape	cytosol, mitochondrion	96.74	90.82
TraesCS5B01G479100.1	Wheat	golgi	96.2	83.89
TraesCS3D01G330500.1	Wheat	cytosol	97.83	71.71
VIT_07s0005g02000.t01	Wine grape	cytosol	96.74	64.96
TraesCS1B01G212500.1	Wheat	cytosol	58.7	56.54
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	59.24	55.05
VIT_14s0060g00690.t01	Wine grape	golgi	96.74	51.74
TraesCS4B01G164400.1	Wheat	endoplasmic reticulum	51.63	51.63
TraesCS6B01G114900.2	Wheat	mitochondrion	53.26	50.52
TraesCS1B01G453100.1	Wheat	cytosol	31.52	49.15
TraesCS5B01G013100.1	Wheat	cytosol	46.2	45.95
TraesCS6B01G295200.1	Wheat	plastid	51.09	38.21
TraesCS1B01G087700.1	Wheat	peroxisome	34.24	31.19
TraesCS2B01G191100.2	Wheat	cytosol, plastid	27.72	23.83

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177
SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS1B01G317000	EnsemblPlants:TraesCS1B01G317000.1	TIGR:cd04150	:	:	:

Description

No Description!

Coordinates

chr1B:-:541466983..541469854

Molecular Weight (calculated)

21107.5 Da

IEP (calculated)

7.624

GRAVY (calculated)

-0.257

Length

184 amino acids

Sequence
(BLAST)

001: MGLTFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRERV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK CKHT

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.