CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90489	Soybean	mitochondrion	100.0	100.0
Solyc05g005190.2.1	Tomato	nucleus	99.45	99.45
KRH45651	Soybean	mitochondrion	99.45	99.45
KRH56584	Soybean	mitochondrion	99.45	99.45
KRH33780	Soybean	mitochondrion, peroxisome	99.45	99.45
KRH69574	Soybean	endoplasmic reticulum, nucleus	99.45	99.45
KRG99354	Soybean	mitochondrion	99.45	99.45
KRG93262	Soybean	nucleus	99.45	99.45
TraesCS3B01G368600.1	Wheat	mitochondrion	98.89	98.89
EES19719	Sorghum	mitochondrion	98.89	98.89
Os05t0489600-03	Rice	plasma membrane	98.89	98.89
Os01t0813400-01	Rice	plasma membrane	98.34	98.34
KRH31758	Soybean	mitochondrion	99.45	97.83
TraesCS3A01G337300.1	Wheat	mitochondrion	98.34	97.8
TraesCS1B01G317000.1	Wheat	mitochondrion	98.34	96.74
Zm00001d038533_P001	Maize	plastid	98.34	96.74
TraesCS1A01G306200.1	Wheat	mitochondrion	98.34	95.7
KRH74584	Soybean	nucleus	98.89	94.21
KRH36902	Soybean	endoplasmic reticulum	95.03	93.48
KRH77051	Soybean	mitochondrion	84.53	84.07
KRH69176	Soybean	endoplasmic reticulum	99.45	80.72
HORVU1Hr1G068790.1	Barley	plastid	98.89	75.85
TraesCS3D01G330500.1	Wheat	cytosol	98.34	70.92
HORVU0Hr1G027130.1	Barley	plasma membrane	98.89	70.47
TraesCS1D01G305900.1	Wheat	golgi	98.89	68.06
KRH07000	Soybean	extracellular, golgi	43.09	64.46
KRH18982	Soybean	endoplasmic reticulum	60.77	63.95
KRH02913	Soybean	cytosol	55.8	60.84
HORVU3Hr1G079700.1	Barley	cytosol	98.89	57.56
KRH77702	Soybean	cytosol	54.14	55.68
KRH27742	Soybean	cytosol	58.56	54.92
KRH29023	Soybean	cytosol	59.12	54.87
KRH24049	Soybean	cytosol	59.12	54.87
KRH34351	Soybean	endoplasmic reticulum	53.59	53.01
KRG92441	Soybean	endoplasmic reticulum	53.59	53.01
KRG92448	Soybean	endoplasmic reticulum	53.59	53.01
KRH34356	Soybean	cytosol, extracellular	38.12	49.64
KRH76824	Soybean	cytosol	48.07	47.03
KRH28677	Soybean	cytosol	48.07	47.03
KRH11380	Soybean	endoplasmic reticulum	37.57	33.33
KRH20906	Soybean	endoplasmic reticulum	37.57	33.33

Protein Annotations

EntrezGene:100778623	EntrezGene:100797931	EntrezGene:100802587	MapMan:22.3.2.1	Gene3D:3.40.50.300	EMBL:ACUP02006084
EMBL:ACUP02012157	EMBL:ACUP02012622	EnsemblPlantsGene:GLYMA_19G219200	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	UniProt:I1NBF7	InterPro:IPR024156	ProteinID:KRG90489.1
ProteinID:KRG90490.1	ProteinID:KRG90491.1	ProteinID:KRG96565.1	EnsemblPlants:KRG96566	ProteinID:KRG96566	ProteinID:KRG96566.1
ProteinID:KRG96567.1	ProteinID:KRH31757.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00005D3779	:

Description

hypothetical protein

Coordinates

chr19:-:47156058..47158416

Molecular Weight (calculated)

20680.9 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.222

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A

Best Arabidopsis Sequence Match ( AT3G62290.2 )
(BLAST)

001: MGLSFGKLFS KLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A

Arabidopsis Description

ARFA1EADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.