CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 1
mitochondrion 3
golgi 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77051	Soybean	mitochondrion	74.38	49.45
KRG99354	Soybean	mitochondrion	65.29	43.65
KRH69574	Soybean	endoplasmic reticulum, nucleus	65.29	43.65
KRH45651	Soybean	mitochondrion	65.29	43.65
KRG90489	Soybean	mitochondrion	64.46	43.09
KRG93262	Soybean	nucleus	64.46	43.09
KRG96566	Soybean	mitochondrion	64.46	43.09
KRH56584	Soybean	mitochondrion	64.46	43.09
KRH33780	Soybean	mitochondrion, peroxisome	64.46	43.09
KRH36902	Soybean	endoplasmic reticulum	64.46	42.39
KRH31758	Soybean	mitochondrion	64.46	42.39
KRH74584	Soybean	nucleus	65.29	41.58
VIT_07s0129g01090.t01	Wine grape	mitochondrion	66.94	40.91
KRH69176	Soybean	endoplasmic reticulum	64.46	34.98
KRH27742	Soybean	cytosol	52.07	32.64
KRH77702	Soybean	cytosol	47.11	32.39
KRH02913	Soybean	cytosol	43.8	31.93
KRH29023	Soybean	cytosol	51.24	31.79
KRH24049	Soybean	cytosol	51.24	31.79
KRH18982	Soybean	endoplasmic reticulum	44.63	31.4
KRH34351	Soybean	endoplasmic reticulum	38.02	25.14
KRG92448	Soybean	endoplasmic reticulum	38.02	25.14
KRG92441	Soybean	endoplasmic reticulum	38.02	25.14
KRH28677	Soybean	cytosol	35.54	23.24
KRH76824	Soybean	cytosol	35.54	23.24
KRH34356	Soybean	cytosol, extracellular	21.49	18.7
KRH20906	Soybean	endoplasmic reticulum	27.27	16.18
KRH11380	Soybean	endoplasmic reticulum	27.27	16.18

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0FW01	EMBL:ACUP02009909	EnsemblPlantsGene:GLYMA_16G060600	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
EnsemblPlants:KRH07000	ProteinID:KRH07000	ProteinID:KRH07000.1	InterPro:P-loop_NTPase	PFAM:PF00025	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF199	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
UniParc:UPI0006EDBFA6	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:5947493..5948322

Molecular Weight (calculated)

13963.4 Da

IEP (calculated)

9.786

GRAVY (calculated)

0.239

Length

121 amino acids

Sequence
(BLAST)

001: MGLTVSPLLR LFYARKEMRI LMGGLDAAGK PTILYKLKLG EIVTTIPTIA IPNSFGIKHI EFWKFCVVLL EFVLTVEYKN VSFTVWDVGG QDKIPPLWRH
101: YFQNTKGLIF VVDNNDRERI F

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.