CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90489	Soybean	mitochondrion	97.83	99.45
KRG96566	Soybean	mitochondrion	97.83	99.45
PGSC0003DMT400065739	Potato	mitochondrion	97.28	98.89
KRG93262	Soybean	nucleus	97.28	98.89
KRG99354	Soybean	mitochondrion	97.28	98.89
KRH69574	Soybean	endoplasmic reticulum, nucleus	97.28	98.89
KRH56584	Soybean	mitochondrion	97.28	98.89
KRH45651	Soybean	mitochondrion	97.28	98.89
KRH33780	Soybean	mitochondrion, peroxisome	97.28	98.89
KRH74584	Soybean	nucleus	97.83	94.74
KRH36902	Soybean	endoplasmic reticulum	93.48	93.48
CDX69567	Canola	mitochondrion	97.28	86.89
Solyc01g008000.2.1	Tomato	plastid, unclear	97.28	85.65
KRH77051	Soybean	mitochondrion	83.15	84.07
CDY09875	Canola	mitochondrion	97.28	84.04
KRH69176	Soybean	endoplasmic reticulum	100.0	82.51
KRH07000	Soybean	extracellular, golgi	42.39	64.46
KRH18982	Soybean	endoplasmic reticulum	59.78	63.95
KRH02913	Soybean	cytosol	54.89	60.84
KRH77702	Soybean	cytosol	53.8	56.25
KRH27742	Soybean	cytosol	58.15	55.44
KRH29023	Soybean	cytosol	58.7	55.38
KRH24049	Soybean	cytosol	58.7	55.38
KRH34351	Soybean	endoplasmic reticulum	52.17	52.46
KRG92448	Soybean	endoplasmic reticulum	52.17	52.46
KRG92441	Soybean	endoplasmic reticulum	52.17	52.46
KRH34356	Soybean	cytosol, extracellular	37.5	49.64
KRH28677	Soybean	cytosol	47.28	47.03
KRH76824	Soybean	cytosol	47.28	47.03
KRH20906	Soybean	endoplasmic reticulum	36.96	33.33
KRH11380	Soybean	endoplasmic reticulum	36.96	33.33

Protein Annotations

EntrezGene:100778623	EntrezGene:100797931	EntrezGene:100802587	MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A0R0HMR0
EMBL:ACUP02006084	EnsemblPlantsGene:GLYMA_10G010200	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156	EnsemblPlants:KRH31758	ProteinID:KRH31758	ProteinID:KRH31758.1
InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182
SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00054A4490	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:965440..967720

Molecular Weight (calculated)

20996.2 Da

IEP (calculated)

6.524

GRAVY (calculated)

-0.219

Length

184 amino acids

Sequence
(BLAST)

001: MGLSFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK VSAE

Best Arabidopsis Sequence Match ( AT5G14670.1 )
(BLAST)

001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIATK VNNLNIPF

Arabidopsis Description

ATARFA1BADP-ribosylation factor A1B [Source:UniProtKB/TrEMBL;Acc:Q9LYJ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.