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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400065739 Potato mitochondrion 86.89 98.89
CDX93979 Canola mitochondrion, peroxisome 86.41 98.34
CDY04706 Canola mitochondrion, peroxisome 85.92 97.79
CDY37791 Canola cytosol 85.92 97.79
CDY41444 Canola mitochondrion 85.92 97.79
CDY44152 Canola mitochondrion, peroxisome 85.92 97.79
CDY27506 Canola cytosol 85.92 97.79
CDY25787 Canola mitochondrion, peroxisome 85.92 97.79
CDY47221 Canola mitochondrion 85.92 97.79
CDY51415 Canola cytosol 85.92 97.79
CDY54291 Canola mitochondrion, peroxisome 85.92 97.79
CDY11588 Canola mitochondrion, peroxisome 85.92 97.79
CDY09441 Canola mitochondrion, peroxisome 85.92 97.79
CDY03747 Canola mitochondrion, peroxisome 85.92 97.79
CDX91717 Canola mitochondrion 85.92 97.79
CDX89139 Canola cytosol 85.92 97.79
CDX80083 Canola cytosol 85.92 97.79
KRH31758 Soybean mitochondrion 86.89 97.28
CDY53050 Canola cytosol 85.44 97.24
CDY47137 Canola peroxisome 85.44 97.24
CDY09875 Canola mitochondrion 98.54 95.31
CDX95712 Canola cytosol 86.89 94.21
KRH74584 Soybean nucleus 86.89 94.21
CDX83340 Canola cytosol 86.41 93.19
CDX68343 Canola cytosol 80.1 90.66
CDX75849 Canola cytosol 49.51 88.7
Solyc01g008000.2.1 Tomato plastid, unclear 86.89 85.65
KRH69176 Soybean endoplasmic reticulum 86.89 80.27
CDY23500 Canola cytosol 81.07 78.04
CDX68781 Canola cytosol 53.4 60.44
CDX75192 Canola cytosol 53.4 60.44
CDX76793 Canola cytosol 52.91 59.89
CDY34756 Canola cytosol 52.91 59.89
CDY45596 Canola cytosol 52.91 59.89
CDY48224 Canola mitochondrion 59.22 59.51
CDX71216 Canola mitochondrion 59.22 58.37
CDY36172 Canola cytosol 50.97 57.69
CDY28739 Canola cytosol 51.46 55.21
CDY16963 Canola cytosol 51.46 55.21
CDY23463 Canola cytosol 51.46 55.21
CDY43149 Canola cytosol 51.46 55.21
CDX69406 Canola cytosol 51.46 55.21
CDY29751 Canola cytosol 46.12 51.91
CDY36874 Canola cytosol 46.12 51.91
CDY16265 Canola cytosol 46.12 51.91
CDY53727 Canola cytosol 46.12 51.91
CDY29231 Canola cytosol 41.26 45.95
CDY36479 Canola cytosol 41.26 45.95
CDY13039 Canola cytosol 41.26 34.69
CDY25962 Canola mitochondrion 46.6 34.66
CDY38908 Canola cytosol 30.58 30.73
CDY00519 Canola cytosol 30.58 30.58
CDY31913 Canola cytosol 30.58 30.58
CDY32591 Canola cytosol 30.58 24.9
Protein Annotations
MapMan:22.3.2.1Gene3D:3.40.50.300GO:A0A078BYX9EnsemblPlants:CDX69567ProteinID:CDX69567ProteinID:CDX69567.1
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622
GO:GO:0005623EnsemblPlantsGene:GSBRNA2T00135576001InterPro:IPR024156InterPro:P-loop_NTPasePFAM:PF00025PRINTS:PR00328
PFscan:PS51417PANTHER:PTHR11711PANTHER:PTHR11711:SF182SMART:SM00175SMART:SM00177SMART:SM00178
SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARFInterPro:Small_GTPase_ARF/SARTIGRFAMs:TIGR00231UniParc:UPI0004EEC9EE
Description
BnaA10g19160D
Coordinates
chrLK031790:-:851105..853071
Molecular Weight (calculated)
23527.3 Da
IEP (calculated)
6.360
GRAVY (calculated)
-0.170
Length
206 amino acids
Sequence
(BLAST)
001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK IVRSSPYANS GDDSIFIHVD
201: QTFILI
Best Arabidopsis Sequence Match ( AT5G14670.1 )
(BLAST)
001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIATK VNNLNIPF
Arabidopsis Description
ATARFA1BADP-ribosylation factor A1B [Source:UniProtKB/TrEMBL;Acc:Q9LYJ3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.